FiT-DB / Search/ Help/ Sample detail

Os03g0255900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9 (0.0371) R2 : 0.497
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.8 (0.0935) R2dC : 0.435 R2C : 0.319
β3 : 1.16 (0.123) R2dE : 0.115 R2E : -0.0867
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.791 (0.0813) R2dN8 : 0.136 R2N8 : 0.0395
σ : 0.688
deviance : 218.43
__
_____
C
peak time of C : 3.04
E
wheather : radiation
threshold : 20
memory length : 1330
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
201.31 0.667 9 0.597 1.8 1.18 -1.68 -0.789 0.826 3.07 20 1342 -- --
202.5 0.663 9 0.533 1.81 1.19 -1.5 -- 0.805 3.05 20 1334 -- --
210.26 0.675 8.99 0.59 1.8 1.19 -- -0.384 0.826 3.04 20.01 1341 -- --
210.49 0.676 9 0.541 1.81 1.2 -- -- 0.811 2.99 20 1336 -- --
231.91 0.709 9.04 0.688 -- 1.68 -- -0.348 0.789 -- 14.64 429 -- --
242.43 0.73 9.06 0.363 1.66 -- -1.84 -- 0.527 3.52 -- -- -- --
252.92 0.745 9.06 0.395 1.66 -- -- -- 0.538 3.52 -- -- -- --
230.87 0.708 9.05 0.373 -- 1.69 -- -- 0.608 -- 9.848 432 -- --
218.43 0.688 9 -- 1.8 1.16 -- -- 0.791 3.04 20 1330 -- --
405.98 0.941 9.06 0.464 -- -- -- -- 0.582 -- -- -- -- --
257.03 0.75 9.07 -- 1.66 -- -- -- 0.494 3.52 -- -- -- --
234.45 0.713 9.05 -- -- 1.73 -- -- 0.592 -- 10 440 -- --
411.67 0.947 9.07 -- -- -- -- -- 0.53 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 198.28 temperature 30 720 < th dose independent rect. 16 14
2 198.35 humidity 70 720 < th dose independent rect. 16 3
4 199.22 temperature 30 720 < th dose independent rect. 15 7
6 199.32 temperature 30 720 > th dose independent rect. 16 2
8 199.77 humidity 70 720 < th dose independent rect. 16 16
12 200.07 radiation 20 1440 < th dose independent rect. 11 22
13 200.43 humidity 70 1440 > th dose independent rect. 17 21
50 201.40 radiation 20 1440 < th dose dependent rect. 11 22
52 201.49 humidity 70 1440 < th dose dependent rect. 13 4
53 201.62 humidity 70 1440 < th dose independent rect. 17 22
62 201.78 humidity 70 1440 < th dose independent rect. 11 21
74 202.14 radiation 20 1440 < th dose independent rect. 15 23
90 202.16 humidity 70 1440 < th dose independent sin 18 NA
91 202.18 temperature 25 720 > th dose dependent rect. 17 1
96 202.25 humidity 70 1440 < th dose independent rect. 11 8
98 202.28 humidity 70 720 > th dose independent rect. 16 14
118 202.38 radiation 20 1440 < th dose dependent rect. 16 22
123 202.44 temperature 30 720 < th dose independent sin 15 NA
135 202.44 humidity 80 720 < th dose dependent rect. 16 17
154 202.55 humidity 70 720 < th dose independent sin 13 NA
165 202.71 humidity 70 1440 < th dose independent rect. 6 13
177 202.73 humidity 80 720 < th dose dependent rect. 16 3
183 202.80 humidity 70 1440 > th dose independent rect. 10 22
189 202.84 humidity 70 1440 < th dose independent no NA NA
261 202.88 humidity 70 1440 < th dose dependent rect. 13 21
285 203.04 radiation 20 1440 < th dose independent rect. 6 18
301 203.07 radiation 20 1440 < th dose independent rect. 20 21
311 203.08 radiation 20 1440 < th dose independent rect. 5 12
338 203.10 radiation 20 1440 < th dose independent no NA NA
360 203.11 radiation 20 1440 < th dose independent rect. 22 23
362 203.11 humidity 80 1440 < th dose dependent rect. 24 20
373 203.12 radiation 1 1440 > th dose dependent rect. 12 21
411 203.18 humidity 80 1440 < th dose dependent rect. 6 14
415 203.19 temperature 30 720 > th dose independent sin 13 NA
416 203.19 humidity 70 1440 > th dose independent sin 18 NA
435 203.24 radiation 20 1440 < th dose dependent rect. 6 18
445 203.28 humidity 70 720 > th dose independent rect. 16 6
456 203.30 radiation 20 1440 < th dose dependent rect. 6 12
500 203.36 radiation 20 1440 < th dose independent rect. 11 6
502 203.37 radiation 20 1440 < th dose independent rect. 11 13
516 203.39 radiation 20 1440 < th dose dependent rect. 19 23
527 203.41 humidity 70 1440 > th dose independent rect. 10 14
561 203.44 humidity 70 1440 > th dose independent rect. 10 11
567 203.44 radiation 20 1440 < th dose dependent no NA NA
577 203.45 temperature 25 720 > th dose dependent rect. 16 3
584 203.45 radiation 20 1440 < th dose dependent rect. 22 23
631 203.51 radiation 20 1440 < th dose independent sin 23 NA
654 203.57 humidity 80 1440 < th dose dependent rect. 15 23
662 203.59 humidity 70 1440 > th dose independent rect. 5 19
704 203.64 humidity 70 1440 > th dose independent no NA NA
721 203.65 humidity 70 1440 > th dose independent rect. 22 23
786 203.68 humidity 80 1440 < th dose dependent rect. 6 22
808 203.70 humidity 80 1440 < th dose dependent no NA NA
829 203.72 wind 5 14400 > th dose dependent rect. 7 2
852 203.75 wind 9 43200 > th dose dependent rect. 14 4
867 203.77 humidity 80 1440 < th dose dependent rect. 9 23
888 203.81 radiation 20 1440 < th dose dependent rect. 8 23
907 203.84 humidity 80 1440 < th dose dependent sin 21 NA
939 203.89 wind 5 14400 > th dose independent rect. 24 11
978 203.92 radiation 20 1440 < th dose independent sin 13 NA
992 203.93 radiation 30 1440 < th dose dependent sin 13 NA