Os03g0251000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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Os03g0251000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1479.48 | 1.81 | 4.61 | -5.34 | 0.461 | -3.09 | -1.36 | 12 | -1.88 | 8.59 | 4.939 | 1353 | 22.8 | -- |
| 1572.5 | 1.85 | 4.81 | -5.4 | 0.28 | -3.45 | -1.12 | -- | -1.93 | 8.8 | 10.6 | 1382 | 0.362 | -- |
| 1483.92 | 1.79 | 4.6 | -5.41 | 0.488 | -2.97 | -- | 12.1 | -1.85 | 7.54 | 4.935 | 1351 | 22.4 | -- |
| 1576.46 | 1.85 | 4.81 | -5.45 | 0.299 | -3.54 | -- | -- | -1.89 | 10.7 | 11.43 | 1378 | 0.526 | -- |
| 1495.43 | 1.8 | 4.6 | -5.38 | -- | -3 | -- | 12.2 | -1.87 | -- | 5.067 | 1332 | 22.2 | -- |
| 1682.5 | 1.92 | 4.77 | -6.11 | 0.547 | -- | -0.753 | -- | -1.76 | 6.64 | -- | -- | -- | -- |
| 1683.86 | 1.92 | 4.77 | -6.12 | 0.547 | -- | -- | -- | -1.76 | 6.4 | -- | -- | -- | -- |
| 1579.63 | 1.85 | 4.81 | -5.4 | -- | -3.52 | -- | -- | -1.89 | -- | 13.65 | 1382 | 23.6 | -- |
| 1862.73 | 2.01 | 4.4 | -- | 0.552 | -5.55 | -- | -- | -0.114 | 5.61 | 10.13 | 47436 | 21.6 | -- |
| 1699.4 | 1.93 | 4.78 | -6.11 | -- | -- | -- | -- | -1.75 | -- | -- | -- | -- | -- |
| 2671.79 | 2.42 | 4.62 | -- | 0.473 | -- | -- | -- | -1.08 | 7.12 | -- | -- | -- | -- |
| 1861.58 | 2.01 | 4.39 | -- | -- | -5.57 | -- | -- | -0.12 | -- | 15.35 | 47337 | 21.9 | -- |
| 2683.6 | 2.42 | 4.63 | -- | -- | -- | -- | -- | -1.07 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1478.00 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 5 |
| 2 | 1480.50 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 3 |
| 4 | 1485.73 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 5 | 1487.48 | wind | 5 | 1440 | < th | dose dependent | rect. | 22 | 14 |
| 6 | 1487.72 | wind | 5 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 8 | 1488.14 | wind | 3 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 10 | 1489.12 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 12 | 1490.56 | wind | 3 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 17 | 1492.39 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 24 | 1494.04 | wind | 1 | 1440 | > th | dose dependent | rect. | 22 | 14 |
| 28 | 1495.25 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 29 | 1495.49 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 33 | 1496.73 | wind | 5 | 1440 | < th | dose dependent | sin | 5 | NA |
| 37 | 1497.14 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 45 | 1498.18 | wind | 3 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 85 | 1502.61 | wind | 3 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 95 | 1503.44 | wind | 3 | 1440 | > th | dose independent | sin | 5 | NA |
| 97 | 1503.58 | wind | 1 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 106 | 1504.32 | wind | 1 | 43200 | < th | dose independent | sin | 13 | NA |
| 110 | 1504.51 | wind | 1 | 1440 | > th | dose dependent | sin | 6 | NA |
| 123 | 1505.71 | wind | 3 | 1440 | < th | dose independent | sin | 5 | NA |
| 129 | 1505.90 | wind | 1 | 43200 | > th | dose independent | sin | 13 | NA |
| 130 | 1505.90 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 138 | 1506.37 | wind | 5 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 173 | 1508.44 | wind | 5 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 179 | 1508.90 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 14 |
| 183 | 1509.07 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 189 | 1509.59 | wind | 3 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 202 | 1510.28 | wind | 3 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 225 | 1511.32 | wind | 3 | 1440 | > th | dose independent | rect. | 1 | 19 |
| 241 | 1511.88 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 244 | 1511.97 | wind | 5 | 1440 | < th | dose dependent | rect. | 1 | 17 |
| 253 | 1512.50 | wind | 1 | 43200 | < th | dose dependent | sin | 12 | NA |
| 267 | 1512.92 | wind | 3 | 1440 | < th | dose independent | rect. | 1 | 19 |
| 281 | 1513.49 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 311 | 1514.59 | wind | 3 | 1440 | > th | dose independent | rect. | 22 | 21 |
| 351 | 1515.87 | wind | 1 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 377 | 1516.64 | wind | 1 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 398 | 1517.03 | wind | 3 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 399 | 1517.04 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 434 | 1517.88 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 444 | 1518.20 | wind | 1 | 1440 | > th | dose dependent | rect. | 22 | 20 |
| 447 | 1518.35 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 16 |
| 456 | 1518.54 | temperature | 20 | 14400 | < th | dose dependent | sin | 23 | NA |
| 457 | 1518.54 | wind | 9 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 463 | 1518.71 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 474 | 1518.94 | wind | 3 | 1440 | < th | dose independent | rect. | 1 | 22 |
| 498 | 1519.54 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 541 | 1520.74 | wind | 3 | 1440 | > th | dose independent | rect. | 1 | 22 |
| 568 | 1521.26 | temperature | 20 | 14400 | < th | dose dependent | rect. | 8 | 18 |
| 590 | 1521.65 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 592 | 1521.68 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 622 | 1522.11 | wind | 5 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 646 | 1522.53 | temperature | 20 | 14400 | < th | dose dependent | sin | 19 | NA |
| 726 | 1523.80 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 727 | 1523.82 | temperature | 20 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 871 | 1526.10 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 897 | 1526.53 | wind | 5 | 1440 | < th | dose dependent | no | NA | NA |
| 929 | 1526.99 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 934 | 1527.07 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 935 | 1527.07 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 1 |