Os03g0250900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0250900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.71 | 0.478 | 2.18 | 4.92 | 0.0294 | -72.5 | 0.348 | 447 | -0.0297 | 6.59 | 994.6 | 648 | -- | -- |
| 4254.14 | 3.04 | 2.97 | 1.13 | 1.77 | -62.5 | -5.52 | -- | -0.543 | 16.1 | 994.5 | 222 | -- | -- |
| 103.9 | 0.475 | 2.18 | 4.91 | 0.0498 | -72.6 | -- | 447 | -0.0319 | 3.24 | 994.5 | 658 | -- | -- |
| 1449.69 | 1.77 | 3.95 | -0.631 | 1.19 | -28.5 | -- | -- | -1.97 | 2.93 | 994.5 | 226 | -- | -- |
| 104.04 | 0.475 | 2.18 | 4.93 | -- | -72.7 | -- | 448 | -0.0306 | -- | 994.6 | 652 | -- | -- |
| 125.01 | 0.524 | 2.98 | 0.104 | 0.0838 | -- | 0.226 | -- | -0.0461 | 3.44 | -- | -- | -- | -- |
| 125.11 | 0.524 | 2.99 | 0.0998 | 0.0878 | -- | -- | -- | -0.0472 | 2.02 | -- | -- | -- | -- |
| 125.57 | 0.522 | 2.99 | 0.104 | -- | -0.0419 | -- | -- | -0.0453 | -- | 995 | 181 | -- | -- |
| 427.71 | 0.963 | 3.07 | -- | 0.654 | -16.3 | -- | -- | -0.46 | 14 | 994.5 | 224 | -- | -- |
| 125.58 | 0.524 | 2.99 | 0.103 | -- | -- | -- | -- | -0.0452 | -- | -- | -- | -- | -- |
| 125.37 | 0.524 | 2.99 | -- | 0.0897 | -- | -- | -- | -0.0583 | 2.05 | -- | -- | -- | -- |
| 121.32 | 0.513 | 2.98 | -- | -- | 0.879 | -- | -- | -0.0344 | -- | 998.3 | 67 | -- | -- |
| 125.86 | 0.524 | 2.99 | -- | -- | -- | -- | -- | -0.0566 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.82 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 18 | 22 |
| 2 | 102.95 | atmosphere | 995 | 720 | < th | dose independent | rect. | 18 | 22 |
| 3 | 103.80 | atmosphere | 995 | 720 | < th | dose independent | sin | 7 | NA |
| 4 | 103.88 | atmosphere | 995 | 720 | < th | dose independent | rect. | 14 | 1 |
| 45 | 103.88 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 86 | 104.59 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 87 | 104.71 | atmosphere | 995 | 720 | < th | dose dependent | sin | 7 | NA |
| 90 | 104.78 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 2 |
| 92 | 104.79 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 97 | 104.81 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 24 | 2 |
| 100 | 104.92 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 1 |
| 127 | 105.69 | atmosphere | 995 | 720 | > th | dose independent | sin | 4 | NA |
| 141 | 106.87 | humidity | 80 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 185 | 108.02 | atmosphere | 995 | 720 | > th | dose independent | no | NA | NA |
| 190 | 108.30 | atmosphere | 995 | 720 | > th | dose independent | sin | 19 | NA |
| 199 | 108.48 | humidity | 80 | 30 | < th | dose dependent | rect. | 19 | 11 |
| 201 | 108.51 | humidity | 80 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 237 | 108.86 | atmosphere | 995 | 720 | > th | dose independent | sin | 16 | NA |
| 238 | 108.86 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 243 | 108.94 | atmosphere | 995 | 720 | < th | dose independent | no | NA | NA |
| 493 | 109.73 | temperature | 25 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 538 | 110.04 | atmosphere | 995 | 720 | < th | dose dependent | no | NA | NA |
| 549 | 110.04 | temperature | 25 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 732 | 110.09 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 879 | 112.07 | atmosphere | 995 | 720 | < th | dose independent | rect. | 18 | 1 |
| 899 | 112.07 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 973 | 112.93 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 24 | 6 |