Os03g0249800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0249800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.06 | 0.519 | 6.53 | 1.79 | 1.74 | 0.422 | 1.22 | -0.158 | 0.724 | 6.84 | 89.85 | 103 | -- | -- |
| 122.18 | 0.515 | 6.53 | 1.81 | 1.74 | 0.424 | 1.25 | -- | 0.726 | 6.81 | 89.61 | 105 | -- | -- |
| 125.78 | 0.522 | 6.53 | 1.8 | 1.75 | 0.43 | -- | -0.271 | 0.717 | 6.82 | 89.69 | 105 | -- | -- |
| 126.18 | 0.523 | 6.54 | 1.83 | 1.75 | 0.425 | -- | -- | 0.722 | 6.8 | 89.66 | 105 | -- | -- |
| 202.33 | 0.662 | 6.54 | 2 | -- | -1.21 | -- | 0.202 | 0.906 | -- | 74 | 523 | -- | -- |
| 130.71 | 0.536 | 6.52 | 1.75 | 1.56 | -- | 1.26 | -- | 0.811 | 7.38 | -- | -- | -- | -- |
| 135 | 0.544 | 6.52 | 1.77 | 1.56 | -- | -- | -- | 0.809 | 7.36 | -- | -- | -- | -- |
| 201.41 | 0.661 | 6.54 | 1.87 | -- | -1.12 | -- | -- | 0.889 | -- | 74.91 | 525 | -- | -- |
| 213.42 | 0.68 | 6.57 | -- | 1.71 | 0.307 | -- | -- | 0.545 | 6.87 | 89.22 | 96 | -- | -- |
| 264.24 | 0.76 | 6.55 | 1.8 | -- | -- | -- | -- | 0.834 | -- | -- | -- | -- | -- |
| 217.97 | 0.691 | 6.56 | -- | 1.58 | -- | -- | -- | 0.611 | 7.28 | -- | -- | -- | -- |
| 292.82 | 0.797 | 6.59 | -- | -- | -1.05 | -- | -- | 0.683 | -- | 74.25 | 499 | -- | -- |
| 349.71 | 0.873 | 6.6 | -- | -- | -- | -- | -- | 0.635 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.42 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 6 | 114.79 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 16 | 116.39 | humidity | 90.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 48 | 117.62 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 76 | 118.49 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 90 | 118.84 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 18 |
| 91 | 118.84 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 21 |
| 93 | 118.89 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 111 | 119.15 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 154 | 119.63 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 166 | 119.75 | humidity | 90.0 | 720 | < th | dose independent | rect. | 16 | 8 |
| 209 | 120.15 | humidity | 90.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 243 | 120.37 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 8 |
| 253 | 120.44 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 255 | 120.45 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 11 |
| 262 | 120.47 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 2 |
| 264 | 120.48 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 21 | 7 |
| 272 | 120.51 | humidity | 70.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 298 | 120.64 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 3 |
| 336 | 120.76 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 5 |
| 362 | 120.87 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 404 | 121.00 | humidity | 90.0 | 90 | < th | dose independent | sin | 8 | NA |
| 460 | 121.21 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 10 |
| 461 | 121.21 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 14 |
| 465 | 121.23 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 6 |
| 524 | 121.43 | humidity | 90.0 | 90 | < th | dose independent | rect. | 10 | 23 |
| 531 | 121.45 | humidity | 90.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 535 | 121.46 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 552 | 121.50 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 12 |
| 583 | 121.60 | humidity | 90.0 | 720 | < th | dose independent | rect. | 13 | 11 |
| 584 | 121.60 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 592 | 121.63 | precipitation | 0.1 | 270 | > th | dose independent | sin | 10 | NA |
| 604 | 121.66 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 620 | 121.71 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 15 | 16 |
| 628 | 121.73 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 9 | NA |
| 644 | 121.76 | humidity | 90.0 | 720 | > th | dose independent | sin | 17 | NA |
| 655 | 121.78 | wind | 9.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 660 | 121.79 | humidity | 90.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 676 | 121.83 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 682 | 121.85 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 685 | 121.85 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 11 |
| 710 | 121.91 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 726 | 121.97 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 755 | 122.02 | wind | 9.0 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 776 | 122.06 | wind | 9.0 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 792 | 122.08 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 800 | 122.09 | wind | 9.0 | 14400 | > th | dose independent | rect. | 3 | 12 |
| 819 | 122.12 | humidity | 90.0 | 90 | < th | dose independent | no | NA | NA |
| 847 | 122.16 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 878 | 122.18 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 894 | 122.19 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 903 | 122.20 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 906 | 122.21 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 938 | 122.24 | wind | 9.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 964 | 122.27 | wind | 9.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 992 | 122.32 | wind | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 997 | 122.32 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 23 |
| 998 | 122.32 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |