Os03g0244000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0244000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.51 | 0.492 | 13.5 | -2.84 | 0.723 | -1.48 | 0.788 | -3.92 | -1.19 | 7.63 | 0.7899 | 1442 | -- | -- |
| 119.86 | 0.51 | 13.6 | -3.12 | 0.706 | -0.883 | 1.03 | -- | -1.16 | 6.47 | 2.118 | 1603 | -- | -- |
| 110.95 | 0.491 | 13.5 | -2.84 | 0.699 | -1.54 | -- | -4.05 | -1.19 | 7.35 | 0.78 | 1458 | -- | -- |
| 119.87 | 0.51 | 13.5 | -3.09 | 0.806 | -1.02 | -- | -- | -1.17 | 5.45 | 2.09 | 1655 | -- | -- |
| 135.58 | 0.542 | 13.5 | -2.82 | -- | -1.72 | -- | -4.45 | -1.17 | -- | 0.8199 | 1484 | -- | -- |
| 131.53 | 0.538 | 13.5 | -3.11 | 0.746 | -- | 0.816 | -- | -1.14 | 7.5 | -- | -- | -- | -- |
| 133.37 | 0.541 | 13.5 | -3.09 | 0.747 | -- | -- | -- | -1.14 | 7.47 | -- | -- | -- | -- |
| 148.48 | 0.568 | 13.5 | -3.05 | -- | -0.892 | -- | -- | -1.19 | -- | 2.27 | 1517 | -- | -- |
| 365.16 | 0.89 | 13.6 | -- | 1.38 | -1.25 | -- | -- | -1.06 | 6.4 | 7.75 | 2099 | -- | -- |
| 163.19 | 0.597 | 13.6 | -3.08 | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
| 384.6 | 0.917 | 13.5 | -- | 0.722 | -- | -- | -- | -0.799 | 7.76 | -- | -- | -- | -- |
| 318.12 | 0.831 | 13.5 | -- | -- | -1.78 | -- | -- | -0.73 | -- | 9.712 | 47520 | -- | -- |
| 412.76 | 0.948 | 13.5 | -- | -- | -- | -- | -- | -0.79 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.32 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 13 | 104.51 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 15 | 104.65 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 16 | 104.65 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 28 | 105.59 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 46 | 106.12 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 48 | 106.14 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 51 | 106.18 | wind | 9e+00 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 53 | 106.20 | wind | 9e+00 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 66 | 106.42 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 77 | 106.62 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 84 | 106.76 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 114 | 107.09 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 118 | 107.11 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 128 | 107.20 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 129 | 107.20 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 130 | 107.20 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 158 | 107.53 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 160 | 107.53 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 161 | 107.58 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 236 | 107.97 | radiation | 1e+01 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 271 | 108.09 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 283 | 108.12 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 292 | 108.13 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 301 | 108.16 | precipitation | 1e-01 | 43200 | > th | dose dependent | sin | 20 | NA |
| 321 | 108.20 | atmosphere | 1e+03 | 43200 | < th | dose independent | sin | 2 | NA |
| 334 | 108.23 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 338 | 108.24 | atmosphere | 1e+03 | 43200 | > th | dose independent | sin | 2 | NA |
| 378 | 108.30 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 7 | 14 |
| 445 | 108.36 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 447 | 108.36 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 524 | 108.41 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 19 | 19 |
| 687 | 108.51 | atmosphere | 1e+03 | 43200 | < th | dose independent | no | NA | NA |
| 797 | 108.57 | atmosphere | 1e+03 | 43200 | > th | dose independent | no | NA | NA |
| 945 | 108.67 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 24 | 4 |