Os03g0237200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0237200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.12 | 0.6 | 6.08 | -0.214 | 0.931 | 0.829 | -0.842 | -0.00951 | -0.786 | 20.5 | 45.95 | 617 | -- | -- |
| 163.12 | 0.595 | 6.08 | -0.214 | 0.93 | 0.828 | -0.843 | -- | -0.786 | 20.5 | 45.94 | 616 | -- | -- |
| 165.31 | 0.599 | 6.08 | -0.211 | 0.94 | 0.821 | -- | -0.174 | -0.771 | 20.5 | 45.94 | 615 | -- | -- |
| 165.36 | 0.599 | 6.08 | -0.186 | 0.943 | 0.797 | -- | -- | -0.782 | 20.4 | 45.92 | 618 | -- | -- |
| 199.46 | 0.658 | 6.02 | -0.256 | -- | 1.26 | -- | -0.348 | -0.788 | -- | 40.79 | 722 | -- | -- |
| 177.85 | 0.625 | 6.06 | -0.156 | 1.32 | -- | -0.633 | -- | -0.67 | 19.5 | -- | -- | -- | -- |
| 178.96 | 0.626 | 6.06 | -0.141 | 1.31 | -- | -- | -- | -0.671 | 19.5 | -- | -- | -- | -- |
| 198.48 | 0.656 | 6.09 | -0.216 | -- | 1.25 | -- | -- | -0.915 | -- | 40.82 | 730 | -- | -- |
| 166.27 | 0.601 | 6.08 | -- | 0.943 | 0.791 | -- | -- | -0.763 | 20.4 | 45.98 | 618 | -- | -- |
| 271.47 | 0.77 | 6.03 | -0.161 | -- | -- | -- | -- | -0.691 | -- | -- | -- | -- | -- |
| 179.49 | 0.627 | 6.06 | -- | 1.32 | -- | -- | -- | -0.655 | 19.5 | -- | -- | -- | -- |
| 200.52 | 0.66 | 6.08 | -- | -- | 1.26 | -- | -- | -0.88 | -- | 40.82 | 719 | -- | -- |
| 272.15 | 0.77 | 6.03 | -- | -- | -- | -- | -- | -0.674 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 8 |
| 3 | 156.12 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 4 | 157.16 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 16 | 158.36 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 27 | 159.22 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 10 |
| 28 | 159.22 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 10 | 14 |
| 36 | 159.69 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 43 | 159.89 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 6 |
| 46 | 159.93 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 14 | 14 |
| 50 | 160.12 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 13 |
| 55 | 160.23 | temperature | 25.0 | 30 | > th | dose independent | rect. | 14 | 9 |
| 60 | 160.29 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 11 |
| 61 | 160.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 63 | 160.32 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 14 | 9 |
| 67 | 160.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 16 |
| 69 | 160.38 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 70 | 160.39 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 71 | 160.39 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 14 | 11 |
| 72 | 160.40 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 75 | 160.47 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 8 |
| 86 | 160.61 | radiation | 1.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 87 | 160.61 | radiation | 40.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 93 | 160.67 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 6 |
| 98 | 160.70 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 14 |
| 103 | 160.74 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 106 | 160.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 115 | 160.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 141 | 161.08 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 8 |
| 142 | 161.09 | temperature | 25.0 | 30 | > th | dose independent | rect. | 14 | 6 |
| 153 | 161.17 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 7 |
| 157 | 161.20 | wind | 7.0 | 30 | < th | dose independent | rect. | 14 | 18 |
| 169 | 161.27 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 184 | 161.35 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 8 |
| 188 | 161.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 193 | 161.43 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 8 |
| 194 | 161.43 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 14 |
| 201 | 161.48 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 215 | 161.55 | humidity | 70.0 | 270 | < th | dose independent | rect. | 12 | 20 |
| 224 | 161.60 | humidity | 70.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 230 | 161.62 | humidity | 60.0 | 10 | > th | dose independent | rect. | 24 | 10 |
| 237 | 161.64 | wind | 7.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 241 | 161.64 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 14 | 18 |
| 262 | 161.68 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 18 |
| 279 | 161.80 | radiation | 20.0 | 270 | < th | dose independent | sin | 14 | NA |
| 282 | 161.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 8 |
| 285 | 161.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 291 | 161.83 | wind | 9.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 293 | 161.83 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 298 | 161.86 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 316 | 161.91 | temperature | 25.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 323 | 161.94 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 338 | 161.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 339 | 161.95 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 344 | 161.97 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 11 |
| 353 | 162.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 364 | 162.03 | wind | 7.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 368 | 162.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 372 | 162.05 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 378 | 162.08 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 8 | 4 |
| 390 | 162.11 | humidity | 50.0 | 30 | > th | dose independent | rect. | 10 | 14 |
| 391 | 162.11 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 14 | 6 |
| 403 | 162.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 404 | 162.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 405 | 162.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 406 | 162.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 407 | 162.17 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 20 | 8 |
| 414 | 162.21 | temperature | 25.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 420 | 162.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 422 | 162.23 | wind | 9.0 | 90 | < th | dose dependent | rect. | 14 | 5 |
| 450 | 162.32 | radiation | 20.0 | 270 | > th | dose independent | sin | 14 | NA |
| 464 | 162.36 | radiation | 40.0 | 30 | < th | dose independent | rect. | 24 | 10 |
| 466 | 162.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 490 | 162.42 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 491 | 162.43 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 15 |
| 511 | 162.48 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 526 | 162.51 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 14 | 18 |
| 530 | 162.53 | radiation | 40.0 | 270 | < th | dose independent | rect. | 19 | 17 |
| 549 | 162.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 17 |
| 553 | 162.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 559 | 162.60 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 562 | 162.60 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 15 |
| 590 | 162.69 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 6 |
| 597 | 162.71 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 24 | 8 |
| 607 | 162.74 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 630 | 162.77 | wind | 9.0 | 30 | < th | dose dependent | rect. | 14 | 18 |
| 664 | 162.81 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 17 |
| 686 | 162.83 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 691 | 162.85 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 695 | 162.86 | radiation | 1.0 | 270 | > th | dose independent | sin | 16 | NA |
| 696 | 162.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 700 | 162.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 703 | 162.87 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 8 |
| 711 | 162.89 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 714 | 162.90 | radiation | 1.0 | 270 | < th | dose independent | sin | 17 | NA |
| 716 | 162.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 718 | 162.90 | wind | 7.0 | 30 | < th | dose independent | rect. | 24 | 10 |
| 728 | 162.92 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 749 | 162.93 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 10 |
| 769 | 162.98 | temperature | 25.0 | 90 | < th | dose independent | rect. | 19 | 6 |
| 772 | 162.98 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 777 | 162.99 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 784 | 163.01 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 801 | 163.05 | radiation | 20.0 | 30 | < th | dose independent | rect. | 24 | 11 |
| 802 | 163.05 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 24 | 10 |
| 821 | 163.10 | temperature | 25.0 | 90 | > th | dose independent | rect. | 14 | 16 |
| 835 | 163.13 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 10 |
| 889 | 163.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 16 |
| 891 | 163.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 16 |
| 923 | 163.24 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 17 | 10 |
| 925 | 163.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 931 | 163.26 | humidity | 90.0 | 30 | < th | dose independent | rect. | 14 | 9 |
| 933 | 163.26 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 19 | 5 |
| 935 | 163.27 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 946 | 163.30 | humidity | 70.0 | 10 | > th | dose independent | rect. | 17 | 10 |
| 948 | 163.30 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 21 |
| 965 | 163.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 7 |