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Os03g0230500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Inositol 1, 3, 4-trisphosphate 56-kinase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.2 (0.0245) R2 : 0.861
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.12 (0.0636) R2dC : 0.737 R2C : 0.738
β3 : -1.21 (0.0608) R2dE : 0.122 R2E : 0.117
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.129 (0.0514) R2dN8 : 0.00275 R2N8 : -0.00043
σ : 0.459
deviance : 97.1
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_____
C
peak time of C : 7.06
E
wheather : temperature
threshold : 19.9
memory length : 159
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 21.3
open length of G : 5.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
75.23 0.408 13.2 -0.68 3.14 -1.36 2.16 0.53 0.0912 7.12 19.7 271 21.1 4.13
75.75 0.405 13.2 -0.698 3.14 -1.37 2.13 -- 0.0845 7.09 19.77 261 21.1 4.26
87.26 0.435 13.2 -0.646 3.12 -1.34 -- 0.298 0.0988 7.14 19.8 282 21.2 3.65
86.89 0.434 13.2 -0.723 3.13 -1.27 -- -- 0.0152 7.02 19.64 176 21.3 5.22
119.15 0.508 13.3 -0.19 -- -2.63 -- -0.594 0.184 -- 18.89 263 10.9 14.2
112.49 0.497 13.2 -0.836 3.2 -- 2.08 -- 0.0504 8.02 -- -- -- --
125.34 0.524 13.2 -0.778 3.19 -- -- -- 0.0488 8.03 -- -- -- --
122.44 0.515 13.3 -0.219 -- -2.72 -- -- 0.199 -- 19.1 352 10.6 13.4
97.1 0.459 13.2 -- 3.12 -1.21 -- -- 0.129 7.06 19.9 159 21.3 5.6
683.44 1.22 13.3 -0.748 -- -- -- -- 0.0891 -- -- -- -- --
141.3 0.556 13.2 -- 3.19 -- -- -- 0.135 8.04 -- -- -- --
124.71 0.52 13.3 -- -- -2.76 -- -- 0.229 -- 19.1 351 10.6 13.4
698.19 1.23 13.3 -- -- -- -- -- 0.172 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.87 temperature 20.0 270 > th dose independent rect. 21 4
2 76.47 temperature 20.0 270 > th dose independent rect. 20 6
3 76.84 temperature 10.0 270 > th dose dependent rect. 20 6
5 77.49 temperature 10.0 270 > th dose dependent rect. 21 4
15 79.26 temperature 20.0 10 > th dose independent rect. 23 5
16 79.28 temperature 15.0 270 > th dose dependent rect. 23 1
27 79.98 temperature 15.0 10 > th dose dependent rect. 23 5
55 82.54 precipitation 0.1 270 < th dose independent rect. 1 20
56 82.54 precipitation 0.1 270 < th dose dependent rect. 1 20
60 82.78 precipitation 0.1 270 < th dose independent rect. 2 18
61 82.78 precipitation 0.1 270 < th dose dependent rect. 2 18
68 83.48 precipitation 0.1 270 < th dose independent rect. 16 14
69 83.48 precipitation 0.1 270 < th dose dependent rect. 16 14
72 83.64 humidity 50.0 270 > th dose dependent rect. 21 4
87 84.39 humidity 50.0 270 > th dose dependent rect. 20 6
90 84.53 precipitation 0.1 270 < th dose independent rect. 21 4
91 84.53 precipitation 0.1 270 < th dose dependent rect. 21 4
96 84.63 atmosphere 1015.0 270 < th dose independent rect. 21 4
97 84.63 wind 9.0 270 < th dose independent rect. 6 10
100 84.76 radiation 1.0 270 < th dose dependent rect. 21 4
101 84.77 temperature 10.0 270 > th dose independent rect. 21 4
102 84.77 temperature 30.0 270 < th dose independent rect. 21 4
103 84.77 humidity 50.0 270 > th dose independent rect. 21 4
106 84.77 atmosphere 995.0 270 > th dose independent rect. 21 4
107 84.77 radiation 1.0 270 < th dose independent rect. 21 4
112 84.77 temperature 10.0 270 > th dose independent rect. 1 20
118 84.79 wind 9.0 270 < th dose independent rect. 21 4
119 84.80 precipitation 0.1 270 < th dose independent rect. 20 6
120 84.80 precipitation 0.1 270 < th dose dependent rect. 20 6
131 85.08 temperature 10.0 270 > th dose independent rect. 20 6
132 85.08 temperature 30.0 270 < th dose independent rect. 20 6
133 85.08 humidity 50.0 270 > th dose independent rect. 20 6
136 85.08 atmosphere 995.0 270 > th dose independent rect. 20 6
137 85.08 radiation 1.0 270 < th dose independent rect. 20 6
142 85.08 temperature 10.0 270 > th dose independent rect. 2 18
143 85.08 atmosphere 1015.0 270 < th dose independent rect. 2 18
144 85.08 radiation 1.0 270 < th dose dependent rect. 20 6
150 85.12 wind 9.0 270 < th dose independent rect. 20 6
167 85.54 precipitation 0.1 270 < th dose independent rect. 24 23
168 85.54 precipitation 0.1 270 < th dose dependent rect. 24 23
171 85.57 atmosphere 1015.0 270 < th dose independent rect. 20 6
173 85.61 temperature 10.0 270 > th dose independent rect. 6 10
174 85.61 atmosphere 1015.0 270 < th dose independent rect. 6 10
175 85.61 temperature 10.0 270 > th dose independent rect. 16 14
176 85.61 radiation 40.0 270 < th dose independent rect. 16 14
185 85.77 precipitation 0.1 270 < th dose independent rect. 3 2
187 85.77 precipitation 0.1 270 < th dose dependent rect. 3 2
197 85.91 temperature 20.0 270 > th dose independent rect. 6 20
205 85.98 precipitation 0.1 270 < th dose independent rect. 6 10
206 85.98 wind 9.0 270 < th dose independent rect. 1 20
207 85.98 precipitation 0.1 270 < th dose dependent rect. 6 10
209 86.00 atmosphere 1015.0 270 < th dose independent rect. 1 20
223 86.03 wind 9.0 270 < th dose independent rect. 16 14
234 86.08 wind 9.0 270 < th dose independent rect. 2 18
259 86.24 wind 9.0 270 < th dose dependent rect. 21 4
273 86.38 radiation 10.0 90 < th dose independent rect. 4 18
276 86.49 radiation 40.0 90 < th dose dependent rect. 3 19
277 86.50 radiation 40.0 270 < th dose dependent rect. 1 9
285 86.58 humidity 50.0 270 > th dose dependent rect. 23 1
288 86.61 radiation 40.0 90 < th dose dependent rect. 3 8
289 86.63 atmosphere 1015.0 270 < th dose independent rect. 23 1
291 86.65 wind 5.0 270 < th dose independent rect. 3 2
295 86.66 wind 9.0 270 < th dose independent rect. 5 22
297 86.67 radiation 40.0 270 < th dose dependent rect. 15 15
304 86.73 wind 9.0 270 < th dose dependent rect. 3 2
337 86.84 radiation 40.0 270 < th dose dependent rect. 2 17
345 86.91 wind 5.0 90 < th dose independent rect. 3 4
346 86.91 atmosphere 995.0 270 > th dose independent rect. 2 18
368 86.95 wind 7.0 90 < th dose dependent rect. 3 4
376 86.99 radiation 10.0 10 < th dose independent rect. 4 19
378 87.00 precipitation 0.1 270 < th dose independent rect. 2 4
379 87.00 precipitation 0.1 270 < th dose dependent rect. 2 4
400 87.08 atmosphere 995.0 270 > th dose independent rect. 1 20
419 87.16 radiation 20.0 270 < th dose dependent rect. 2 7
426 87.21 radiation 10.0 270 < th dose dependent rect. 2 17
450 87.28 wind 1.0 270 > th dose independent rect. 21 4
478 87.33 atmosphere 995.0 270 > th dose independent rect. 6 9
493 87.41 precipitation 0.1 270 < th dose independent rect. 23 1
496 87.41 precipitation 0.1 270 < th dose dependent rect. 23 1
500 87.42 wind 9.0 270 < th dose independent rect. 23 1
501 87.42 temperature 10.0 270 > th dose independent rect. 23 1
502 87.42 temperature 30.0 270 < th dose independent rect. 23 1
503 87.42 humidity 50.0 270 > th dose independent rect. 23 1
506 87.42 atmosphere 995.0 270 > th dose independent rect. 23 1
507 87.42 radiation 1.0 270 < th dose independent rect. 23 1
512 87.42 temperature 10.0 270 > th dose independent rect. 24 23
513 87.42 radiation 1.0 270 < th dose dependent rect. 23 1
518 87.42 radiation 40.0 270 < th dose dependent rect. 1 19
522 87.43 humidity 60.0 10 > th dose dependent rect. 22 6
535 87.53 wind 9.0 270 < th dose independent rect. 6 20
538 87.56 wind 9.0 270 < th dose dependent rect. 23 1
540 87.57 radiation 40.0 270 < th dose independent rect. 1 19
552 87.64 temperature 10.0 270 > th dose independent rect. 3 2
554 87.64 temperature 30.0 270 < th dose independent rect. 3 2
555 87.64 humidity 50.0 270 > th dose independent rect. 3 2
558 87.64 atmosphere 995.0 270 > th dose independent rect. 3 2
559 87.64 atmosphere 1010.0 270 < th dose independent rect. 3 2
561 87.64 radiation 1.0 270 < th dose independent rect. 3 2
566 87.64 temperature 10.0 270 > th dose independent rect. 5 22
567 87.64 radiation 30.0 270 < th dose dependent rect. 3 2
574 87.68 humidity 80.0 10 > th dose independent rect. 23 5
611 87.76 radiation 40.0 270 < th dose independent rect. 2 17
613 87.76 temperature 10.0 90 > th dose dependent rect. 7 20
616 87.77 radiation 20.0 270 < th dose independent rect. 1 8
630 87.83 atmosphere 995.0 90 > th dose independent rect. 17 14
642 87.90 temperature 20.0 10 > th dose independent rect. 8 20
657 88.00 wind 1.0 270 > th dose independent rect. 20 6
689 88.17 radiation 20.0 90 < th dose independent rect. 3 8
704 88.23 humidity 50.0 90 > th dose independent rect. 17 14
720 88.29 temperature 10.0 270 > th dose independent rect. 2 4
722 88.29 temperature 30.0 270 < th dose independent rect. 2 4
723 88.29 humidity 50.0 270 > th dose independent rect. 2 4
726 88.29 atmosphere 995.0 270 > th dose independent rect. 2 4
727 88.29 atmosphere 1015.0 270 < th dose independent rect. 2 4
728 88.29 radiation 20.0 270 < th dose independent rect. 2 4
732 88.29 temperature 10.0 270 > th dose independent rect. 6 20
738 88.31 wind 9.0 90 < th dose dependent rect. 3 18
746 88.34 atmosphere 1015.0 10 < th dose independent rect. 23 5
756 88.39 radiation 40.0 270 < th dose dependent rect. 2 4
776 88.46 humidity 50.0 270 > th dose dependent rect. 3 2
881 88.83 wind 9.0 10 < th dose independent rect. 22 6
882 88.83 temperature 10.0 10 > th dose independent rect. 22 6
883 88.83 temperature 30.0 10 < th dose independent rect. 22 6
884 88.83 humidity 50.0 10 > th dose independent rect. 22 6
887 88.83 atmosphere 995.0 10 > th dose independent rect. 22 6
888 88.83 radiation 1.0 10 < th dose independent rect. 22 6
893 88.83 temperature 10.0 10 > th dose independent rect. 4 18
895 88.83 atmosphere 1015.0 10 < th dose independent rect. 4 18
897 88.83 radiation 1.0 10 < th dose dependent rect. 22 6
903 88.85 precipitation 0.1 10 < th dose independent rect. 4 18
905 88.85 precipitation 0.1 10 < th dose dependent rect. 4 18
911 88.89 atmosphere 1015.0 90 < th dose independent rect. 7 20