Os03g0227500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0227500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.88 | 0.281 | 8.31 | -0.371 | 0.525 | -2.57 | -0.0823 | 13.6 | 0.103 | 6.22 | 1000 | 269 | -- | -- |
| 38.39 | 0.289 | 8.15 | 0.486 | 0.541 | -0.515 | -0.0513 | -- | 0.105 | 6.23 | 995.4 | 133 | -- | -- |
| 35.9 | 0.279 | 8.31 | -0.37 | 0.524 | -2.56 | -- | 13.6 | 0.103 | 6.22 | 1000 | 265 | -- | -- |
| 37.76 | 0.286 | 8.16 | 0.467 | 0.54 | -0.414 | -- | -- | 0.109 | 6.12 | 996.4 | 221 | -- | -- |
| 50.11 | 0.33 | 8.32 | -0.339 | -- | -2.59 | -- | 13.8 | 0.114 | -- | 999.8 | 257 | -- | -- |
| 38.87 | 0.292 | 8.16 | 0.496 | 0.527 | -- | -0.0622 | -- | 0.0931 | 6.14 | -- | -- | -- | -- |
| 38.88 | 0.292 | 8.16 | 0.495 | 0.527 | -- | -- | -- | 0.0933 | 6.14 | -- | -- | -- | -- |
| 52.22 | 0.337 | 8.17 | 0.49 | -- | -0.355 | -- | -- | 0.116 | -- | 996.5 | 211 | -- | -- |
| 43.73 | 0.308 | 8.16 | -- | 0.554 | -0.485 | -- | -- | 0.0564 | 6.21 | 996.4 | 228 | -- | -- |
| 53.26 | 0.341 | 8.17 | 0.51 | -- | -- | -- | -- | 0.105 | -- | -- | -- | -- | -- |
| 45.34 | 0.315 | 8.18 | -- | 0.534 | -- | -- | -- | 0.0382 | 6.09 | -- | -- | -- | -- |
| 58.54 | 0.356 | 8.18 | -- | -- | -0.433 | -- | -- | 0.0597 | -- | 996.6 | 224 | -- | -- |
| 60.12 | 0.362 | 8.19 | -- | -- | -- | -- | -- | 0.0484 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.32 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 2 | 34.40 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 3 | 34.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 4 | 34.43 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 5 | 34.44 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 10 | 34.47 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 17 | 34.52 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 23 | 34.56 | wind | 3.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 29 | 34.58 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 32 | 34.61 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 34 | 34.63 | wind | 3.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 41 | 34.70 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 47 | 34.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 49 | 34.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 52 | 34.72 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 54 | 34.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 58 | 34.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 65 | 34.81 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 66 | 34.81 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 67 | 34.82 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 74 | 34.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 75 | 34.84 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 76 | 34.84 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 81 | 34.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 82 | 34.87 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 88 | 34.87 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 92 | 34.89 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 105 | 34.92 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 107 | 34.92 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 114 | 34.96 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 124 | 34.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 132 | 34.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 141 | 35.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 142 | 35.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 144 | 35.03 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 145 | 35.03 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 147 | 35.04 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 155 | 35.07 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 156 | 35.07 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 165 | 35.09 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 167 | 35.10 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 178 | 35.12 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 190 | 35.15 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 192 | 35.16 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 199 | 35.17 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 201 | 35.17 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 202 | 35.17 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 203 | 35.17 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 215 | 35.21 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 220 | 35.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 221 | 35.23 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 6 |
| 224 | 35.23 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 6 |
| 239 | 35.26 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 244 | 35.26 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 258 | 35.28 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 278 | 35.31 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 298 | 35.33 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 301 | 35.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 308 | 35.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 324 | 35.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 327 | 35.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 328 | 35.38 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 331 | 35.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 338 | 35.38 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 10 |
| 341 | 35.39 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 365 | 35.41 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 370 | 35.41 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 380 | 35.43 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 383 | 35.43 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 384 | 35.43 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 399 | 35.44 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 20 | 10 |
| 411 | 35.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 412 | 35.46 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 419 | 35.47 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 441 | 35.49 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 476 | 35.51 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 488 | 35.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 493 | 35.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 517 | 35.54 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 23 | 19 |
| 522 | 35.54 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 534 | 35.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 544 | 35.56 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 545 | 35.56 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 563 | 35.56 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 577 | 35.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 617 | 35.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 629 | 35.61 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 637 | 35.61 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 673 | 35.63 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 687 | 35.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 703 | 35.66 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 720 | 35.66 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 5 |
| 750 | 35.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 765 | 35.70 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 798 | 35.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 811 | 35.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 816 | 35.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 849 | 35.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 862 | 35.73 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 872 | 35.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 873 | 35.74 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 4 |
| 883 | 35.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 930 | 35.77 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 944 | 35.77 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 961 | 35.78 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 969 | 35.78 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 984 | 35.79 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 985 | 35.79 | wind | 3.0 | 1440 | > th | dose independent | rect. | 20 | 17 |