Os03g0213200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0213200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.37 | 0.634 | 7.85 | 1.03 | 1.56 | -1.26 | -0.437 | 1.61 | -0.134 | 21.4 | 28.08 | 1283 | -- | -- |
| 182.63 | 0.629 | 7.89 | 0.702 | 1.54 | -1.09 | -0.393 | -- | -0.165 | 21.5 | 27.75 | 1278 | -- | -- |
| 183.03 | 0.63 | 7.86 | 1.01 | 1.57 | -1.24 | -- | 1.39 | -0.131 | 21.4 | 27.96 | 1275 | -- | -- |
| 183.22 | 0.63 | 7.89 | 0.71 | 1.56 | -1.09 | -- | -- | -0.15 | 21.4 | 27.66 | 1282 | -- | -- |
| 320.77 | 0.834 | 7.86 | 0.578 | -- | -0.887 | -- | -0.529 | -0.185 | -- | 27.94 | 1403 | -- | -- |
| 236.51 | 0.721 | 7.88 | 0.366 | 1.49 | -- | -0.446 | -- | -0.106 | 21.1 | -- | -- | -- | -- |
| 237.17 | 0.721 | 7.88 | 0.382 | 1.49 | -- | -- | -- | -0.105 | 21 | -- | -- | -- | -- |
| 320.21 | 0.833 | 7.83 | 0.718 | -- | -0.969 | -- | -- | -0.0892 | -- | 26.7 | 1402 | -- | -- |
| 195.52 | 0.651 | 7.91 | -- | 1.56 | -0.983 | -- | -- | -0.268 | 21.4 | 28.34 | 1275 | -- | -- |
| 364.77 | 0.892 | 7.84 | 0.385 | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
| 241.02 | 0.726 | 7.89 | -- | 1.49 | -- | -- | -- | -0.147 | 21.1 | -- | -- | -- | -- |
| 332.49 | 0.849 | 7.87 | -- | -- | -0.822 | -- | -- | -0.274 | -- | 28.6 | 1400 | -- | -- |
| 368.67 | 0.896 | 7.85 | -- | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.56 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 6 | 179.94 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 9 | 180.47 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 26 | 182.21 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 30 | 183.07 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 36 | 183.42 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 40 | 183.91 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 76 | 184.06 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 114 | 184.62 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 117 | 184.66 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 138 | 184.81 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 142 | 184.87 | temperature | 30 | 1440 | < th | dose independent | sin | 13 | NA |
| 177 | 185.14 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 252 | 185.50 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 279 | 185.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 285 | 185.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 294 | 185.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 12 |
| 310 | 185.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 10 |
| 327 | 185.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 337 | 185.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 344 | 185.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 345 | 185.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 354 | 185.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 365 | 185.96 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 397 | 186.08 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 400 | 186.09 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 418 | 186.17 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 438 | 186.23 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 454 | 186.27 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 585 | 186.44 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 604 | 186.48 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 621 | 186.52 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 658 | 186.58 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 3 |
| 691 | 186.76 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 723 | 186.96 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 866 | 187.41 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 905 | 187.49 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 10 |
| 909 | 187.50 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 926 | 187.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 933 | 187.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 941 | 187.61 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 947 | 187.62 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 950 | 187.63 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 7 |
| 963 | 187.69 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 969 | 187.73 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 993 | 187.78 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 3 |