Os03g0209700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0209700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.13 | 0.572 | 4.95 | 0.198 | 0.45 | -0.595 | 0.217 | -0.209 | 0.122 | 18.3 | 20.71 | 285 | -- | -- |
| 148.3 | 0.567 | 4.95 | 0.171 | 0.45 | -0.575 | 0.276 | -- | 0.118 | 18.2 | 20.7 | 280 | -- | -- |
| 147.58 | 0.566 | 4.93 | 0.195 | 0.432 | -0.629 | -- | -0.262 | 0.137 | 17.8 | 21.4 | 377 | -- | -- |
| 147.47 | 0.566 | 4.96 | 0.155 | 0.441 | -0.567 | -- | -- | 0.0883 | 17.8 | 21.37 | 414 | -- | -- |
| 156.57 | 0.583 | 4.93 | 0.231 | -- | -0.646 | -- | -0.371 | 0.0996 | -- | 21.3 | 414 | -- | -- |
| 160.9 | 0.595 | 4.93 | 0.342 | 0.541 | -- | 0.337 | -- | 0.243 | 17.8 | -- | -- | -- | -- |
| 161.17 | 0.595 | 4.93 | 0.34 | 0.542 | -- | -- | -- | 0.245 | 17.8 | -- | -- | -- | -- |
| 157.2 | 0.584 | 4.96 | 0.123 | -- | -0.659 | -- | -- | 0.0526 | -- | 21.4 | 412 | -- | -- |
| 148.06 | 0.567 | 4.97 | -- | 0.434 | -0.598 | -- | -- | 0.0653 | 17.7 | 21.3 | 421 | -- | -- |
| 176.43 | 0.621 | 4.92 | 0.323 | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
| 164.21 | 0.599 | 4.94 | -- | 0.537 | -- | -- | -- | 0.207 | 17.8 | -- | -- | -- | -- |
| 157.51 | 0.585 | 4.96 | -- | -- | -0.68 | -- | -- | 0.0355 | -- | 21.33 | 414 | -- | -- |
| 179.18 | 0.625 | 4.93 | -- | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 138.42 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 3 | 138.47 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 4 | 138.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 5 | 138.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 6 | 139.08 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 7 | 139.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 8 | 139.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 9 | 139.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 10 | 139.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 14 | 139.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 15 | 139.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 17 | 139.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 18 | 139.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 25 | 140.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 26 | 140.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 27 | 140.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 28 | 140.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 8 |
| 43 | 140.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 56 | 141.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 59 | 141.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 61 | 141.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 97 | 141.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 98 | 141.89 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 100 | 141.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 101 | 141.97 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 105 | 142.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 106 | 142.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 115 | 142.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 116 | 142.46 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 125 | 142.53 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 139 | 142.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 148 | 142.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 149 | 142.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 154 | 143.01 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 164 | 143.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 186 | 143.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 217 | 143.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 218 | 143.58 | wind | 9.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 219 | 143.58 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 222 | 143.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 225 | 143.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 8 |
| 231 | 143.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 244 | 143.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 258 | 143.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 8 |
| 263 | 143.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 266 | 143.93 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 273 | 143.97 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 4 | NA |
| 276 | 143.97 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 4 | NA |
| 279 | 143.98 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 4 | NA |
| 288 | 144.03 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 308 | 144.08 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 326 | 144.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 332 | 144.09 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 343 | 144.11 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 346 | 144.13 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 360 | 144.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 362 | 144.23 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 370 | 144.25 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 373 | 144.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 392 | 144.41 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 418 | 144.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 419 | 144.49 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 421 | 144.49 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 429 | 144.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 431 | 144.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 433 | 144.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 436 | 144.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 437 | 144.54 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 443 | 144.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 12 |
| 444 | 144.57 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 448 | 144.58 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 463 | 144.64 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 467 | 144.65 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 474 | 144.67 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 499 | 144.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 19 |
| 500 | 144.73 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 510 | 144.76 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 517 | 144.78 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 531 | 144.83 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 537 | 144.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 539 | 144.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 540 | 144.86 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 544 | 144.88 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 552 | 144.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 557 | 144.92 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 578 | 144.99 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 579 | 144.99 | wind | 9.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 585 | 145.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 609 | 145.09 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 626 | 145.14 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 633 | 145.16 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 639 | 145.17 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 645 | 145.18 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 652 | 145.19 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 664 | 145.20 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 736 | 145.32 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 747 | 145.35 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 773 | 145.41 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 776 | 145.41 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 783 | 145.44 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 791 | 145.45 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 801 | 145.48 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 827 | 145.53 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 830 | 145.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 838 | 145.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 16 |
| 846 | 145.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 862 | 145.59 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 4 | NA |
| 894 | 145.65 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 896 | 145.65 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 899 | 145.66 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 919 | 145.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 936 | 145.73 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 9 |
| 961 | 145.77 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 984 | 145.79 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 985 | 145.79 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 4 |