Os03g0206600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0206600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF588 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.82 | 0.325 | 10.5 | -0.783 | 1.46 | 1.79 | 0.0455 | -1.02 | -0.442 | 4.29 | 15.03 | 374 | -- | -- |
| 48.42 | 0.324 | 10.5 | -0.614 | 1.46 | 1.82 | 0.261 | -- | -0.396 | 4.31 | 13.98 | 376 | -- | -- |
| 47.81 | 0.322 | 10.5 | -0.781 | 1.46 | 1.8 | -- | -1.03 | -0.441 | 4.29 | 14.9 | 376 | -- | -- |
| 48.6 | 0.325 | 10.5 | -0.616 | 1.46 | 1.8 | -- | -- | -0.397 | 4.3 | 14.6 | 377 | -- | -- |
| 90.8 | 0.444 | 10.5 | -0.846 | -- | 1.69 | -- | -0.715 | -0.448 | -- | 9.054 | 1171 | -- | -- |
| 84.29 | 0.43 | 10.4 | -0.223 | 0.997 | -- | -0.0974 | -- | -0.134 | 3.63 | -- | -- | -- | -- |
| 84.32 | 0.43 | 10.4 | -0.222 | 0.996 | -- | -- | -- | -0.133 | 3.63 | -- | -- | -- | -- |
| 91.2 | 0.445 | 10.5 | -0.688 | -- | 1.69 | -- | -- | -0.406 | -- | 6.229 | 1174 | -- | -- |
| 57.57 | 0.353 | 10.5 | -- | 1.37 | 1.52 | -- | -- | -0.293 | 4.23 | 11.37 | 377 | -- | -- |
| 139.46 | 0.552 | 10.4 | -0.18 | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
| 85.61 | 0.433 | 10.4 | -- | 0.992 | -- | -- | -- | -0.109 | 3.63 | -- | -- | -- | -- |
| 102.2 | 0.471 | 10.5 | -- | -- | 1.41 | -- | -- | -0.289 | -- | 4.019 | 1164 | -- | -- |
| 140.31 | 0.553 | 10.4 | -- | -- | -- | -- | -- | -0.0868 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 28 | 42.82 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 52 | 43.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 17 |
| 63 | 43.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 6 |
| 65 | 43.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 67 | 43.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 83 | 44.17 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 212 | 45.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 269 | 46.53 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 14 |
| 534 | 48.77 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 570 | 48.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 695 | 49.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 844 | 50.52 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 847 | 50.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 945 | 50.96 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |