Os03g0206400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0206400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.85 | 0.479 | 13.1 | 0.69 | 0.368 | 1.3 | 1.33 | -1.5 | 0.699 | 4.05 | 12.46 | 14 | -- | -- |
| 110.16 | 0.493 | 13.1 | 0.678 | 0.308 | 1.5 | 1.84 | -- | 0.662 | 7.71 | 12.46 | 14 | -- | -- |
| 107.42 | 0.483 | 13.1 | 0.696 | 0.45 | 1.19 | -- | -1.07 | 0.679 | 2.81 | 12.98 | 13 | -- | -- |
| 113.67 | 0.497 | 13.1 | 0.714 | 0.499 | 1.12 | -- | -- | 0.695 | 2.28 | 12.97 | 15 | -- | -- |
| 113.08 | 0.495 | 13.1 | 0.719 | -- | 1.45 | -- | -1.05 | 0.746 | -- | 14.48 | 24 | -- | -- |
| 130.35 | 0.535 | 13.1 | 0.67 | 1.66 | -- | -0.861 | -- | 0.634 | 0.502 | -- | -- | -- | -- |
| 133.46 | 0.541 | 13.1 | 0.702 | 1.66 | -- | -- | -- | 0.638 | 0.589 | -- | -- | -- | -- |
| 117.92 | 0.506 | 13.1 | 0.725 | -- | 1.45 | -- | -- | 0.745 | -- | 13.56 | 61 | -- | -- |
| 127 | 0.525 | 13.1 | -- | 0.432 | 1.17 | -- | -- | 0.644 | 2.59 | 11.36 | 18 | -- | -- |
| 306.4 | 0.818 | 13.1 | 0.761 | -- | -- | -- | -- | 0.666 | -- | -- | -- | -- | -- |
| 146.46 | 0.566 | 13.2 | -- | 1.67 | -- | -- | -- | 0.56 | 0.609 | -- | -- | -- | -- |
| 131.02 | 0.533 | 13.1 | -- | -- | 1.42 | -- | -- | 0.659 | -- | 10.59 | 66 | -- | -- |
| 321.66 | 0.837 | 13.1 | -- | -- | -- | -- | -- | 0.582 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.75 | radiation | 20 | 90 | < th | dose dependent | rect. | 12 | 22 |
| 3 | 105.02 | radiation | 20 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 6 | 105.13 | radiation | 10 | 10 | < th | dose dependent | no | NA | NA |
| 8 | 105.25 | radiation | 10 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 10 | 105.33 | radiation | 10 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 28 | 106.40 | radiation | 10 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 36 | 107.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 37 | 107.17 | radiation | 10 | 30 | < th | dose dependent | sin | 23 | NA |
| 50 | 107.52 | radiation | 1 | 30 | > th | dose independent | sin | 0 | NA |
| 60 | 108.00 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 62 | 108.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 74 | 108.45 | radiation | 10 | 30 | < th | dose independent | rect. | 7 | 13 |
| 75 | 108.54 | radiation | 10 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 78 | 108.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 79 | 108.59 | radiation | 20 | 90 | < th | dose dependent | rect. | 15 | 19 |
| 87 | 108.76 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 153 | 109.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 154 | 109.93 | radiation | 10 | 30 | < th | dose independent | sin | 22 | NA |
| 186 | 110.25 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 5 |
| 209 | 110.45 | radiation | 10 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 222 | 110.59 | radiation | 20 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 249 | 110.84 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 3 |
| 266 | 111.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 267 | 111.07 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 275 | 111.16 | radiation | 10 | 30 | < th | dose independent | rect. | 13 | 23 |
| 287 | 111.23 | radiation | 10 | 30 | < th | dose independent | no | NA | NA |
| 291 | 111.25 | radiation | 10 | 30 | < th | dose independent | rect. | 15 | 23 |
| 295 | 111.27 | radiation | 10 | 30 | < th | dose independent | rect. | 9 | 23 |
| 330 | 111.48 | radiation | 10 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 338 | 111.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 341 | 111.53 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 345 | 111.56 | radiation | 10 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 373 | 111.77 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 394 | 111.90 | radiation | 10 | 30 | < th | dose independent | rect. | 21 | 23 |
| 408 | 111.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 456 | 112.32 | radiation | 10 | 30 | < th | dose independent | rect. | 17 | 23 |
| 497 | 112.54 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 512 | 112.63 | temperature | 25 | 270 | < th | dose dependent | sin | 5 | NA |
| 552 | 112.88 | radiation | 10 | 30 | < th | dose independent | rect. | 6 | 23 |
| 578 | 113.00 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 11 |
| 598 | 113.09 | radiation | 10 | 90 | > th | dose independent | rect. | 9 | 23 |
| 632 | 113.30 | radiation | 10 | 30 | < th | dose independent | rect. | 1 | 23 |
| 637 | 113.36 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 8 |
| 652 | 113.46 | radiation | 10 | 30 | < th | dose independent | rect. | 4 | 16 |
| 672 | 113.54 | radiation | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 805 | 114.01 | radiation | 10 | 30 | < th | dose independent | rect. | 23 | 23 |
| 955 | 114.42 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 4 |
| 998 | 114.53 | radiation | 20 | 10 | < th | dose independent | rect. | 2 | 13 |