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Os03g0199000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0198) R2 : 0.493
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.706 (0.0518) R2dC : 0.207 R2C : 0.138
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.655 (0.0416) R2dN8 : 0.355 R2N8 : 0.286
σ : 0.373
deviance : 63.59
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.17 0.312 10.2 -0.494 0.701 0.454 -0.216 2.06 -0.759 17.8 83.42 5895 -- --
48.51 0.324 10.2 -0.546 0.68 0.626 -0.248 -- -0.805 17.9 79.74 7481 -- --
44.27 0.31 10.2 -0.494 0.702 0.451 -- 2.04 -0.759 17.7 83.33 5838 -- --
48.52 0.324 10.2 -0.539 0.671 0.622 -- -- -0.803 17.9 79.58 7499 -- --
66.27 0.379 10.2 -0.518 -- 0.769 -- 1.58 -0.819 -- 83.88 4921 -- --
54.13 0.345 10.2 -0.597 0.698 -- -0.207 -- -0.72 17.8 -- -- -- --
54.24 0.345 10.2 -0.596 0.697 -- -- -- -0.721 17.8 -- -- -- --
69.25 0.388 10.2 -0.61 -- 0.846 -- -- -0.823 -- 82 4875 -- --
47.78 0.322 10.2 -- 0.556 0.896 -- -- -0.692 17.6 66.3 23688 -- --
79.41 0.416 10.2 -0.617 -- -- -- -- -0.737 -- -- -- -- --
63.59 0.373 10.2 -- 0.706 -- -- -- -0.655 17.8 -- -- -- --
69.93 0.389 10.1 -- -- 1.06 -- -- -0.632 -- 65.42 23649 -- --
89.46 0.441 10.1 -- -- -- -- -- -0.669 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.45 wind 1.0 14400 < th dose independent rect. 5 1
2 39.92 wind 1.0 14400 > th dose independent rect. 5 1
3 40.71 temperature 20.0 14400 > th dose independent rect. 20 1
4 40.78 wind 5.0 14400 > th dose independent rect. 7 1
5 40.79 wind 5.0 14400 < th dose independent rect. 7 1
6 40.84 temperature 20.0 14400 < th dose independent rect. 20 2
14 41.33 precipitation 0.1 43200 > th dose dependent rect. 16 4
18 41.55 wind 5.0 14400 < th dose independent rect. 5 4
22 41.59 wind 1.0 14400 < th dose independent rect. 2 6
25 41.66 wind 1.0 14400 > th dose independent rect. 2 6
31 41.74 wind 1.0 14400 > th dose independent rect. 4 4
33 41.76 wind 1.0 14400 > th dose independent rect. 24 7
37 41.83 humidity 90.0 14400 > th dose independent rect. 21 1
39 41.89 wind 1.0 14400 < th dose dependent rect. 2 6
45 42.03 humidity 60.0 14400 > th dose independent rect. 10 2
46 42.03 wind 1.0 14400 < th dose independent rect. 24 7
48 42.04 precipitation 0.1 14400 < th dose independent rect. 5 13
49 42.04 precipitation 0.1 14400 < th dose dependent rect. 5 13
51 42.06 wind 1.0 14400 < th dose independent rect. 2 8
52 42.06 precipitation 0.1 14400 > th dose independent rect. 5 13
59 42.12 wind 3.0 14400 > th dose dependent rect. 7 1
74 42.22 wind 1.0 14400 < th dose dependent rect. 4 4
85 42.43 humidity 70.0 14400 < th dose dependent rect. 10 1
88 42.46 wind 1.0 14400 > th dose independent rect. 24 10
99 42.52 humidity 90.0 14400 > th dose dependent rect. 21 1
102 42.54 humidity 50.0 14400 > th dose independent sin 13 NA
105 42.54 wind 1.0 14400 < th dose dependent rect. 2 8
111 42.57 wind 5.0 14400 > th dose dependent rect. 19 1
115 42.58 humidity 50.0 14400 > th dose independent rect. 14 19
116 42.59 humidity 60.0 14400 < th dose independent rect. 9 4
117 42.59 humidity 50.0 14400 > th dose independent rect. 14 10
123 42.60 humidity 50.0 14400 > th dose independent rect. 14 15
124 42.60 wind 9.0 14400 > th dose dependent rect. 16 20
125 42.61 wind 7.0 14400 < th dose independent rect. 18 3
127 42.61 humidity 50.0 14400 > th dose independent rect. 14 7
134 42.62 humidity 50.0 14400 > th dose independent rect. 14 5
137 42.62 humidity 50.0 14400 > th dose independent rect. 14 12
159 42.65 precipitation 0.1 43200 > th dose independent rect. 16 2
160 42.65 wind 1.0 14400 > th dose independent rect. 24 3
163 42.65 humidity 60.0 14400 > th dose independent rect. 8 5
165 42.65 humidity 60.0 14400 > th dose independent rect. 3 10
168 42.66 precipitation 0.1 43200 < th dose independent rect. 16 2
178 42.66 precipitation 0.1 43200 < th dose dependent rect. 16 2
182 42.70 wind 9.0 14400 < th dose independent rect. 17 18
183 42.70 wind 9.0 14400 > th dose independent rect. 16 19
185 42.71 temperature 25.0 14400 < th dose independent rect. 10 1
218 42.79 wind 7.0 14400 < th dose independent rect. 19 1
230 42.85 humidity 60.0 14400 > th dose independent sin 8 NA
233 42.86 precipitation 0.1 14400 > th dose dependent rect. 4 14
246 42.92 temperature 25.0 14400 > th dose independent rect. 10 1
253 42.93 wind 9.0 14400 > th dose dependent rect. 18 17
263 42.95 wind 5.0 14400 < th dose dependent rect. 24 1
266 42.97 humidity 60.0 14400 < th dose independent sin 7 NA
277 43.00 wind 7.0 14400 > th dose independent rect. 18 3
280 43.00 wind 5.0 14400 > th dose dependent rect. 18 15
288 43.03 wind 1.0 43200 < th dose dependent rect. 12 1
290 43.04 wind 7.0 14400 > th dose independent rect. 19 1
302 43.05 wind 9.0 14400 < th dose independent rect. 20 15
325 43.08 wind 5.0 43200 < th dose dependent rect. 5 1
334 43.12 wind 7.0 14400 < th dose independent rect. 18 10
343 43.13 wind 1.0 14400 > th dose dependent rect. 20 10
344 43.13 wind 9.0 14400 < th dose dependent rect. 20 10
371 43.17 precipitation 0.1 43200 > th dose dependent rect. 13 8
394 43.22 wind 9.0 14400 < th dose dependent rect. 20 12
410 43.26 wind 5.0 14400 < th dose independent rect. 19 14
412 43.26 wind 1.0 43200 > th dose dependent rect. 5 1
423 43.28 wind 5.0 14400 > th dose independent rect. 18 16
424 43.29 radiation 20.0 43200 > th dose independent rect. 9 2
440 43.31 wind 9.0 14400 > th dose independent rect. 20 15
444 43.31 wind 9.0 14400 > th dose dependent rect. 16 13
495 43.41 wind 9.0 14400 > th dose dependent rect. 16 9
504 43.42 humidity 90.0 14400 > th dose dependent rect. 9 13
505 43.42 wind 9.0 14400 > th dose dependent rect. 20 16
524 43.45 humidity 50.0 14400 < th dose independent sin 13 NA
536 43.46 wind 9.0 14400 < th dose dependent rect. 7 2
566 43.50 wind 9.0 14400 > th dose dependent rect. 16 4
607 43.54 wind 5.0 14400 > th dose dependent rect. 18 12
614 43.55 wind 9.0 14400 < th dose dependent rect. 4 5
635 43.58 precipitation 0.1 14400 > th dose dependent sin 1 NA
654 43.59 humidity 80.0 14400 > th dose dependent rect. 10 1
656 43.59 humidity 90.0 14400 > th dose dependent rect. 12 10
661 43.60 precipitation 0.1 14400 < th dose independent sin 1 NA
663 43.60 wind 7.0 14400 > th dose independent rect. 17 11
668 43.60 precipitation 0.1 14400 < th dose dependent sin 1 NA
669 43.60 radiation 30.0 43200 < th dose dependent rect. 10 1
676 43.61 precipitation 0.1 14400 > th dose independent sin 1 NA
706 43.63 wind 9.0 14400 < th dose dependent rect. 24 9
725 43.65 wind 9.0 14400 > th dose independent rect. 16 13
737 43.66 wind 1.0 14400 > th dose independent sin 7 NA
761 43.67 humidity 60.0 14400 < th dose dependent rect. 12 7
806 43.70 wind 1.0 14400 < th dose independent rect. 24 3
825 43.72 wind 5.0 14400 < th dose independent rect. 21 1
830 43.72 humidity 60.0 14400 < th dose dependent sin 16 NA
848 43.74 humidity 90.0 14400 > th dose independent rect. 9 13
866 43.76 humidity 90.0 14400 > th dose independent rect. 16 6
881 43.77 wind 1.0 14400 > th dose dependent rect. 24 1
882 43.77 temperature 25.0 14400 < th dose dependent rect. 9 1
900 43.79 humidity 70.0 14400 < th dose dependent sin 8 NA
942 43.82 humidity 60.0 1440 > th dose dependent rect. 10 2
965 43.83 temperature 25.0 14400 > th dose independent rect. 10 3
999 43.85 wind 1.0 14400 > th dose dependent rect. 24 9