Os03g0197900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
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Os03g0197900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF623, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.64 | 0.628 | 3.75 | 1.06 | 0.79 | 1.06 | 2.16 | 1.99 | 0.257 | 2.77 | 61.31 | 1419 | -- | -- |
| 184.29 | 0.632 | 3.74 | 1.27 | 0.663 | 1.21 | 2.1 | -- | 0.308 | 2.73 | 61.89 | 1528 | -- | -- |
| 191.08 | 0.644 | 3.73 | 0.974 | 0.591 | 1.14 | -- | 2.31 | 0.32 | 2.99 | 67.23 | 1679 | -- | -- |
| 199.27 | 0.657 | 3.74 | 1.19 | 0.528 | 1.29 | -- | -- | 0.344 | 2.67 | 67.07 | 1736 | -- | -- |
| 202.78 | 0.667 | 3.75 | 1.14 | -- | 0.758 | -- | 1.89 | 0.261 | -- | 69.15 | 1747 | -- | -- |
| 213.57 | 0.685 | 3.76 | 1.26 | 0.725 | -- | 1.97 | -- | 0.21 | 2.76 | -- | -- | -- | -- |
| 226.48 | 0.705 | 3.77 | 1.21 | 0.747 | -- | -- | -- | 0.198 | 3.25 | -- | -- | -- | -- |
| 213.94 | 0.681 | 3.73 | 1.18 | -- | 1.59 | -- | -- | 0.4 | -- | 69 | 1759 | -- | -- |
| 231.56 | 0.709 | 3.75 | -- | 0.554 | 1.57 | -- | -- | 0.296 | 2.61 | 81 | 1743 | -- | -- |
| 258.1 | 0.751 | 3.77 | 1.25 | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
| 265.35 | 0.762 | 3.8 | -- | 0.771 | -- | -- | -- | 0.0624 | 3.25 | -- | -- | -- | -- |
| 247.99 | 0.733 | 3.74 | -- | -- | 1.91 | -- | -- | 0.327 | -- | 78.59 | 1750 | -- | -- |
| 299.06 | 0.807 | 3.8 | -- | -- | -- | -- | -- | 0.079 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.18 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 4 | 171.62 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 6 | 171.86 | humidity | 90.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 14 | 172.53 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 19 | 172.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 21 | 172.72 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 52 | 174.37 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 53 | 174.37 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 56 | 174.43 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 71 | 174.62 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 72 | 174.62 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 79 | 174.70 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 80 | 174.70 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 106 | 175.24 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 23 | NA |
| 113 | 175.31 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 12 |
| 148 | 175.79 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 156 | 175.84 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 157 | 175.85 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 161 | 175.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 170 | 176.06 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 5 |
| 198 | 176.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 208 | 176.40 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 213 | 176.40 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 228 | 176.49 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 23 | 20 |
| 258 | 176.73 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 259 | 176.73 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 289 | 176.97 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 296 | 177.02 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 303 | 177.04 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 304 | 177.05 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 305 | 177.05 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 340 | 177.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 341 | 177.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 343 | 177.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 377 | 177.53 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 461 | 177.80 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 2 | NA |
| 472 | 177.85 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 22 |
| 474 | 177.85 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 519 | 178.02 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 585 | 178.17 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 1 | NA |
| 590 | 178.18 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 607 | 178.21 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 1 | NA |
| 610 | 178.21 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 1 | NA |
| 621 | 178.23 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 623 | 178.23 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 15 |
| 640 | 178.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 758 | 178.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 837 | 178.69 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 841 | 178.70 | humidity | 60.0 | 1440 | > th | dose dependent | no | NA | NA |
| 866 | 178.77 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 880 | 178.81 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 20 | NA |
| 886 | 178.82 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 20 | NA |
| 887 | 178.82 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 23 |
| 888 | 178.82 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 20 | NA |
| 890 | 178.82 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 930 | 178.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 5 |