Os03g0196800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cyanelle 30S ribosomal protein S10.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0196800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cyanelle 30S ribosomal protein S10.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124 | 0.523 | 12.2 | -0.106 | 0.773 | -5.73 | -0.164 | -14.7 | -0.64 | 20.4 | 8.992 | 185 | -- | -- |
| 131.51 | 0.534 | 12.3 | -0.028 | 0.757 | -1.88 | -0.000723 | -- | -0.646 | 20.4 | 8.601 | 214 | -- | -- |
| 122.87 | 0.516 | 12.2 | -0.111 | 0.786 | -5.7 | -- | -14.3 | -0.626 | 20.4 | 9.475 | 185 | -- | -- |
| 129.75 | 0.531 | 12.3 | -0.129 | 0.837 | -3.47 | -- | -- | -0.713 | 20 | 10.38 | 184 | -- | -- |
| 156.26 | 0.582 | 12.2 | -0.088 | -- | -6.02 | -- | -16 | -0.64 | -- | 9.399 | 172 | -- | -- |
| 140.49 | 0.556 | 12.3 | 0.115 | 0.739 | -- | 0.099 | -- | -0.609 | 20.7 | -- | -- | -- | -- |
| 140.52 | 0.555 | 12.3 | 0.112 | 0.739 | -- | -- | -- | -0.609 | 20.7 | -- | -- | -- | -- |
| 160.61 | 0.59 | 12.3 | 0.026 | -- | -2.38 | -- | -- | -0.649 | -- | 10.4 | 174 | -- | -- |
| 127.23 | 0.525 | 12.3 | -- | 0.842 | -2.68 | -- | -- | -0.656 | 20.5 | 10.4 | 184 | -- | -- |
| 171.33 | 0.612 | 12.3 | 0.11 | -- | -- | -- | -- | -0.616 | -- | -- | -- | -- | -- |
| 140.85 | 0.555 | 12.3 | -- | 0.739 | -- | -- | -- | -0.622 | 20.7 | -- | -- | -- | -- |
| 160.63 | 0.59 | 12.3 | -- | -- | -2.39 | -- | -- | -0.651 | -- | 10.4 | 176 | -- | -- |
| 171.65 | 0.612 | 12.3 | -- | -- | -- | -- | -- | -0.628 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 2 | 116.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 3 | 116.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 4 | 116.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 5 | 116.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 6 | 116.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 7 | 116.52 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 8 | 116.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 9 | 116.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 10 | 116.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 11 | 116.60 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 12 | 116.60 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 13 | 116.61 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 17 | 116.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 19 | 116.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 22 | 116.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 23 | 116.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 24 | 116.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 27 | 116.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 35 | 117.08 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 37 | 117.10 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 39 | 117.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 53 | 117.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 54 | 117.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 65 | 117.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 71 | 117.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 7 |
| 85 | 117.66 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 89 | 117.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 94 | 117.81 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 100 | 117.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 101 | 117.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 105 | 118.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 107 | 118.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 113 | 118.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 16 |
| 115 | 118.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 16 |
| 120 | 118.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 16 |
| 125 | 118.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 137 | 118.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 145 | 118.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 147 | 118.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 148 | 118.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 151 | 118.24 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 165 | 118.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 168 | 118.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 22 |
| 170 | 118.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 22 |
| 171 | 118.30 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 190 | 118.38 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 199 | 118.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 210 | 118.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 211 | 118.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 215 | 118.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 224 | 118.53 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 241 | 118.60 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 299 | 118.82 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 336 | 118.93 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 349 | 118.96 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 353 | 118.97 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 393 | 119.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 414 | 119.11 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 455 | 119.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 456 | 119.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 459 | 119.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 467 | 119.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 469 | 119.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 470 | 119.20 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 471 | 119.20 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 473 | 119.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 475 | 119.20 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 482 | 119.21 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 514 | 119.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 20 |
| 523 | 119.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 20 |
| 529 | 119.28 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 533 | 119.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 536 | 119.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 548 | 119.30 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 552 | 119.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 557 | 119.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 562 | 119.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 580 | 119.33 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 582 | 119.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 18 |
| 585 | 119.33 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 591 | 119.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 18 |
| 607 | 119.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 703 | 119.45 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 786 | 119.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 17 |
| 790 | 119.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 793 | 119.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 10 |
| 815 | 119.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 872 | 119.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 876 | 119.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 15 |
| 878 | 119.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 20 |
| 886 | 119.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 15 |
| 898 | 119.66 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 925 | 119.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 933 | 119.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 955 | 119.71 | temperature | 20.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 964 | 119.72 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 9 |