Os03g0195500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulfate permease (Fragment).
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Os03g0195500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulfate permease (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 251.6 | 0.745 | 2.14 | 5.25 | 0.172 | -116 | -0.0743 | 707 | -0.0508 | 4.68 | 1000 | 91 | 5 | 3 |
| 281.05 | 0.787 | 3 | 0.0955 | 0.17 | 2.2 | -0.0701 | -- | -0.0506 | 4.74 | 1000 | 91 | 5 | 3 |
| 251.61 | 0.739 | 2.14 | 5.25 | 0.172 | -116 | -- | 707 | -0.0504 | 4.78 | 1000 | 91 | 5 | 3 |
| 253.53 | 0.746 | 3 | 0.0897 | 0.163 | 4.85 | -- | -- | -0.0483 | 4.76 | 997.7 | 69 | 5.17 | 3.16 |
| 253.16 | 0.741 | 2.13 | 5.31 | -- | -116 | -- | 706 | -0.0443 | -- | 1000 | 89 | 4.97 | 3.05 |
| 299.66 | 0.812 | 3.01 | 0.141 | 0.239 | -- | 0.266 | -- | -0.0698 | 5.75 | -- | -- | -- | -- |
| 299.81 | 0.811 | 3.01 | 0.142 | 0.241 | -- | -- | -- | -0.0711 | 5.44 | -- | -- | -- | -- |
| 253.42 | 0.741 | 3.01 | 0.0968 | -- | 5.74 | -- | -- | -0.043 | -- | 997.4 | 63 | 5.28 | 2.73 |
| 252.19 | 0.74 | 3.01 | -- | 0.165 | 5.7 | -- | -- | -0.0614 | 4.83 | 997.7 | 76 | 5.13 | 2.85 |
| 302.82 | 0.813 | 3.01 | 0.15 | -- | -- | -- | -- | -0.0652 | -- | -- | -- | -- | -- |
| 300.34 | 0.811 | 3.01 | -- | 0.243 | -- | -- | -- | -0.087 | 5.42 | -- | -- | -- | -- |
| 253.66 | 0.742 | 3.01 | -- | -- | 5.8 | -- | -- | -0.0544 | -- | 997.6 | 75 | 5.14 | 3.06 |
| 303.42 | 0.813 | 3.01 | -- | -- | -- | -- | -- | -0.0819 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 251.60 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 5 | 3 |
| 2 | 251.65 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 3 | 253.13 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 4 |
| 5 | 253.20 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 4 | 1 |
| 6 | 253.20 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 7 | 253.24 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 23 | 256.70 | temperature | 25 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 62 | 269.12 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 2 |
| 83 | 272.94 | wind | 3 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 85 | 273.37 | wind | 9 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 89 | 273.51 | wind | 1 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 90 | 273.56 | wind | 3 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 92 | 273.75 | temperature | 20 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 110 | 274.45 | wind | 3 | 90 | > th | dose independent | rect. | 4 | 1 |
| 115 | 274.52 | temperature | 20 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 159 | 275.43 | temperature | 20 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 216 | 276.62 | wind | 5 | 720 | < th | dose independent | rect. | 21 | 7 |
| 322 | 277.89 | wind | 3 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 361 | 278.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 398 | 278.92 | temperature | 20 | 90 | < th | dose dependent | sin | 2 | NA |
| 416 | 279.19 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 432 | 279.35 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 24 | 1 |
| 434 | 279.41 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 443 | 279.49 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 451 | 279.58 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 2 |
| 604 | 280.51 | humidity | 60 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 621 | 280.52 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 23 | 3 |
| 625 | 280.55 | humidity | 60 | 90 | < th | dose independent | rect. | 9 | 1 |
| 656 | 280.66 | temperature | 20 | 90 | < th | dose dependent | rect. | 24 | 11 |
| 709 | 280.94 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 754 | 281.09 | temperature | 20 | 90 | < th | dose dependent | rect. | 24 | 6 |
| 757 | 281.09 | temperature | 20 | 90 | < th | dose dependent | rect. | 24 | 18 |
| 775 | 281.18 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 13 |
| 788 | 281.23 | temperature | 20 | 10 | > th | dose independent | rect. | 24 | 13 |
| 823 | 281.34 | temperature | 20 | 10 | > th | dose independent | rect. | 2 | 11 |