BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0195500 Os03g0195500|AK111395
(283 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77990.1 | chr1:29317965-29323249 REVERSE LENGTH=678 248 3e-66
AT5G10180.1 | chr5:3193225-3196818 FORWARD LENGTH=678 237 4e-63
AT1G22150.1 | chr1:7818361-7821344 FORWARD LENGTH=657 205 3e-53
AT1G78000.1 | chr1:29329889-29332877 FORWARD LENGTH=654 200 7e-52
AT4G08620.1 | chr4:5500480-5505982 FORWARD LENGTH=650 198 3e-51
AT3G51895.1 | chr3:19251503-19255677 REVERSE LENGTH=659 182 1e-46
AT4G02700.1 | chr4:1189062-1193325 FORWARD LENGTH=647 177 8e-45
AT3G15990.1 | chr3:5427081-5430679 FORWARD LENGTH=654 176 1e-44
AT1G23090.1 | chr1:8185238-8188954 REVERSE LENGTH=632 174 4e-44
AT5G19600.1 | chr5:6613113-6616891 REVERSE LENGTH=635 139 2e-33
AT3G12520.1 | chr3:3967976-3971891 REVERSE LENGTH=678 118 3e-27
AT5G13550.1 | chr5:4355412-4359490 REVERSE LENGTH=686 109 2e-24
>AT1G77990.1 | chr1:29317965-29323249 REVERSE LENGTH=678
Length = 677
Score = 248 bits (632), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 26 ARLVLSSPKPPGVREEFVGVVRKXXXXXXXXXXXXXXXXXXXXXWALTALQTVFPVLQWG 85
+R ++++P+PP + +E +G +R + + L++ FP+L WG
Sbjct: 42 SRWLINTPEPPSMWQELIGYIRTNVLAKKKHKRNKTKNSSSNLVY--SCLKSAFPILSWG 99
Query: 86 RTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGTSREI 145
R Y LF+ D+MAGLTLASL IPQSIGYANLA LDP+YGLYTSVVPPLIY+ MGTSRE+
Sbjct: 100 RQYKLNLFKKDLMAGLTLASLCIPQSIGYANLAGLDPEYGLYTSVVPPLIYSTMGTSREL 159
Query: 146 AIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFGLFRLGFLVDFLS 205
AIGP + DP DP+ YR +VFTVTF AG FQ FGLFRLGFLVDFLS
Sbjct: 160 AIGPVAVVSLLLSSMVRDLQDPVTDPIAYRKIVFTVTFFAGAFQAIFGLFRLGFLVDFLS 219
Query: 206 HAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAVCSALRDP 254
HAA+VGFMAGAAIVI +HFTN TDVVSV+ +V +L P
Sbjct: 220 HAALVGFMAGAAIVIGLQQLKGLFGLTHFTNKTDVVSVLSSVFHSLHHP 268
>AT5G10180.1 | chr5:3193225-3196818 FORWARD LENGTH=678
Length = 677
Score = 237 bits (605), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 148/238 (62%), Gaps = 2/238 (0%)
Query: 22 HPDTARLVLSSPKPPGVREEFVGVVRKXXXXXXXXXXXXXXXXXXXXXWALTALQTVFPV 81
PD ++ +L P+PP E V+ L+ LQ +FP+
Sbjct: 46 QPDRSKWLLDCPEPPSPWHELKRQVKGSFLTKAKKFKSLQKQPFPKQI--LSVLQAIFPI 103
Query: 82 LQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGT 141
W R Y +F++D+MAGLTLASL IPQSIGYA LAKLDPQYGLYTSVVPPLIYA+MGT
Sbjct: 104 FGWCRNYKLTMFKNDLMAGLTLASLCIPQSIGYATLAKLDPQYGLYTSVVPPLIYALMGT 163
Query: 142 SREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFGLFRLGFLV 201
SREIAIGP K++DP DP+ Y+ LV T TF AG+FQ SFGLFRLGFLV
Sbjct: 164 SREIAIGPVAVVSLLISSMLQKLIDPETDPLGYKKLVLTTTFFAGIFQASFGLFRLGFLV 223
Query: 202 DFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAVCSALRDPVSLQT 259
DFLSHAAIVGFM GAAIVI ++FT +TD+VSV++AV + + S T
Sbjct: 224 DFLSHAAIVGFMGGAAIVIGLQQLKGLLGITNFTTNTDIVSVLRAVWRSCQQQWSPHT 281
>AT1G22150.1 | chr1:7818361-7821344 FORWARD LENGTH=657
Length = 656
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 125/188 (66%)
Query: 72 LTALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVV 131
+ +Q+VFPV++WGR YN KLFR D++AGLT+ASL IPQ IGYA LA LDP+YGLY+S V
Sbjct: 72 MLGIQSVFPVIEWGRKYNLKLFRGDLIAGLTIASLCIPQDIGYAKLASLDPKYGLYSSFV 131
Query: 132 PPLIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVS 191
PPL+YA MG+S++IAIGP +DP +P Y L FT TF AGV Q +
Sbjct: 132 PPLVYACMGSSKDIAIGPVAVVSLLLGTLLRAEIDPNTNPNEYLRLAFTSTFFAGVTQAA 191
Query: 192 FGLFRLGFLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAVCSAL 251
G FRLGFL+DFLSHAA+VGFM GAAI I + FT TD+++V+ +V S+
Sbjct: 192 LGFFRLGFLIDFLSHAAVVGFMGGAAITIALQQLKGFLGINKFTKKTDIIAVLSSVISSA 251
Query: 252 RDPVSLQT 259
+ QT
Sbjct: 252 HHGWNWQT 259
>AT1G78000.1 | chr1:29329889-29332877 FORWARD LENGTH=654
Length = 653
Score = 200 bits (509), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 120/188 (63%)
Query: 72 LTALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVV 131
+ LQ+VFPV WGR Y FK FR D+++GLT+ASL IPQ IGYA LA LDP+YGLY+S V
Sbjct: 69 MLGLQSVFPVFDWGRNYTFKKFRGDLISGLTIASLCIPQDIGYAKLANLDPKYGLYSSFV 128
Query: 132 PPLIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVS 191
PPL+YA MG+SR+IAIGP +DP P Y L FT TF AG+ + +
Sbjct: 129 PPLVYACMGSSRDIAIGPVAVVSLLLGTLLRAEIDPNTSPDEYLRLAFTATFFAGITEAA 188
Query: 192 FGLFRLGFLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAVCSAL 251
G FRLGFL+DFLSHAA+VGFM GAAI I FT TD++SV+++V A
Sbjct: 189 LGFFRLGFLIDFLSHAAVVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVLESVFKAA 248
Query: 252 RDPVSLQT 259
+ QT
Sbjct: 249 HHGWNWQT 256
>AT4G08620.1 | chr4:5500480-5505982 FORWARD LENGTH=650
Length = 649
Score = 198 bits (503), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 120/191 (62%)
Query: 71 ALTALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSV 130
AL +Q VFP++ W R Y + FR D++AGLT+ASL IPQ IGYA LA +DP+YGLY+S
Sbjct: 63 ALLGIQAVFPIIGWAREYTLRKFRGDLIAGLTIASLCIPQDIGYAKLANVDPKYGLYSSF 122
Query: 131 VPPLIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQV 190
VPPLIYA MG+SR+IAIGP ++DP +P Y LVFT TF AG+FQ
Sbjct: 123 VPPLIYAGMGSSRDIAIGPVAVVSLLVGTLCQAVIDPKKNPEDYLRLVFTATFFAGIFQA 182
Query: 191 SFGLFRLGFLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAVCSA 250
G RLGFL+DFLSHAA+VGFM GAAI I FT TD+VSV+ +V
Sbjct: 183 GLGFLRLGFLIDFLSHAAVVGFMGGAAITIALQQLKGFLGIKTFTKKTDIVSVMHSVFKN 242
Query: 251 LRDPVSLQTPV 261
+ QT V
Sbjct: 243 AEHGWNWQTIV 253
>AT3G51895.1 | chr3:19251503-19255677 REVERSE LENGTH=659
Length = 658
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 114/180 (63%)
Query: 74 ALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPP 133
L+ P+ +W YN K F+SD++AG+T+ASL IPQ I YA LA L P GLY+S VPP
Sbjct: 63 GLKYFLPIFEWAPRYNLKFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPP 122
Query: 134 LIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFG 193
L+YAV+G+SR++A+G K VD DP Y L FT TF AGV + S G
Sbjct: 123 LVYAVLGSSRDLAVGTVAVASLLTGAMLSKEVDAEKDPKLYLHLAFTATFFAGVLEASLG 182
Query: 194 LFRLGFLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAVCSALRD 253
+FRLGF+VDFLSHA IVGFM GAA V+ HFT+STDV+SV+++V S +
Sbjct: 183 IFRLGFIVDFLSHATIVGFMGGAATVVSLQQLKGIFGLKHFTDSTDVISVMRSVFSQTHE 242
>AT4G02700.1 | chr4:1189062-1193325 FORWARD LENGTH=647
Length = 646
Score = 177 bits (448), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 116/176 (65%)
Query: 74 ALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPP 133
L+ VFP+L+W R Y+ + +SDV++G+T+ASL IPQ I YA LA L P GLY+S+VPP
Sbjct: 54 GLRHVFPILEWARGYSLEYLKSDVISGITIASLAIPQGISYAQLANLPPILGLYSSLVPP 113
Query: 134 LIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFG 193
L+YA+MG+SR++A+G K V+ V+P Y L FT TF AG+ Q G
Sbjct: 114 LVYAIMGSSRDLAVGTVAVASLLTAAMLGKEVNAVVNPKLYLHLAFTATFFAGLMQTCLG 173
Query: 194 LFRLGFLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAVCS 249
L RLGF+V+ LSHAAIVGFM GAA V+ HFT+STD+V+V++++ S
Sbjct: 174 LLRLGFVVEILSHAAIVGFMGGAATVVCLQQLKGLLGLHHFTHSTDIVTVLRSIFS 229
>AT3G15990.1 | chr3:5427081-5430679 FORWARD LENGTH=654
Length = 653
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 109/174 (62%)
Query: 74 ALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPP 133
LQ++FP+ WG Y+ KL RSDV++GLT+ASL IPQ I YA LA L P GLY+S VPP
Sbjct: 70 GLQSLFPIFTWGSQYDLKLLRSDVISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPP 129
Query: 134 LIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFG 193
LIYAV+G+SR +A+GP + V P D + Y L FT TF AGVFQ S G
Sbjct: 130 LIYAVLGSSRHLAVGPVSIASLVMGSMLSESVSPTQDSILYLKLAFTSTFFAGVFQASLG 189
Query: 194 LFRLGFLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAV 247
L RLGF++DFLS A ++GF AGAA+++ HFT +V V+ +V
Sbjct: 190 LLRLGFMIDFLSKATLIGFTAGAAVIVSLQQLKGLLGIVHFTGKMQIVPVMSSV 243
>AT1G23090.1 | chr1:8185238-8188954 REVERSE LENGTH=632
Length = 631
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 112/174 (64%)
Query: 74 ALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPP 133
A Q +FP+LQW Y+F L +SDV++GLT+ASL IPQ I YA LA L P GLY+S VPP
Sbjct: 47 AAQYIFPILQWCPEYSFSLLKSDVVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPP 106
Query: 134 LIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFG 193
L+YAV+G+SR++A+GP + V P DPV + L F+ TF AG+FQ S G
Sbjct: 107 LVYAVLGSSRDLAVGPVSIASLILGSMLRQQVSPVDDPVLFLQLAFSSTFFAGLFQASLG 166
Query: 194 LFRLGFLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAV 247
+ RLGF++DFLS A ++GFM GAAI++ +HFT VV V+ +V
Sbjct: 167 ILRLGFIIDFLSKATLIGFMGGAAIIVSLQQLKGLLGITHFTKHMSVVPVLSSV 220
>AT5G19600.1 | chr5:6613113-6616891 REVERSE LENGTH=635
Length = 634
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 1/173 (0%)
Query: 75 LQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPPL 134
L+ P+ +W Y+ + + DV+AG+T+ SL +PQ I YA LA + P GLY+S VPP
Sbjct: 60 LEYFVPIFEWLPKYDMQKLKYDVLAGITITSLAVPQGISYAKLASIPPIIGLYSSFVPPF 119
Query: 135 IYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFGL 194
+YAV G+S +A+G + + +P Y L+FT T + G+FQ + G
Sbjct: 120 VYAVFGSSNNLAVGTVAACSLLIAETFGEEMIKN-EPELYLHLIFTATLITGLFQFAMGF 178
Query: 195 FRLGFLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXXSHFTNSTDVVSVIKAV 247
RLG LVDFLSH+ I GFM G AI+I HFT+ TDVVSV+ ++
Sbjct: 179 LRLGILVDFLSHSTITGFMGGTAIIILLQQLKGIFGLVHFTHKTDVVSVLHSI 231
>AT3G12520.1 | chr3:3967976-3971891 REVERSE LENGTH=678
Length = 677
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Query: 75 LQTVFPVLQWGRTYNF-KLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPP 133
+ +FP W RTY + + F+ D+MAG+T+ + +PQ++ YA LA L P YGLY+S VP
Sbjct: 63 IDAIFPCFLWIRTYRWHQYFKLDLMAGITVGIMLVPQAMSYARLAGLQPIYGLYSSFVPV 122
Query: 134 LIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFG 193
+YAV G+SR++A+GP IVDP+ + Y L + + G+F+ G
Sbjct: 123 FVYAVFGSSRQLAVGPVALVSLLVSNALSGIVDPSEE--LYTELAILLALMVGIFESIMG 180
Query: 194 LFRLGFLVDFLSHAAIVGFMAGAAIVI 220
RLG+L+ F+SH+ I GF +A+VI
Sbjct: 181 FLRLGWLIRFISHSVISGFTTASAVVI 207
>AT5G13550.1 | chr5:4355412-4359490 REVERSE LENGTH=686
Length = 685
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Query: 75 LQTVFPVLQWGRTYNF-KLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPP 133
+ T+FP +W RTY + + F+ D+MAG+T+ + +PQ++ YA LA L P YGLY+S VP
Sbjct: 76 IDTLFPCFRWIRTYRWSEYFKLDLMAGITVGIMLVPQAMSYAKLAGLPPIYGLYSSFVPV 135
Query: 134 LIYAVMGTSREIAIGPXXXXXXXXXXXXXKIVDPAVDPVTYRALVFTVTFLAGVFQVSFG 193
+YA+ G+SR++AIGP I D + + L + L G+ + G
Sbjct: 136 FVYAIFGSSRQLAIGPVALVSLLVSNALGGIAD--TNEELHIELAILLALLVGILECIMG 193
Query: 194 LFRLGFLVDFLSHAAIVGFMAGAAIVI 220
L RLG+L+ F+SH+ I GF + +AIVI
Sbjct: 194 LLRLGWLIRFISHSVISGFTSASAIVI 220
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,520,412
Number of extensions: 136816
Number of successful extensions: 415
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 407
Number of HSP's successfully gapped: 12
Length of query: 283
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 186
Effective length of database: 8,447,217
Effective search space: 1571182362
Effective search space used: 1571182362
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 111 (47.4 bits)