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Os03g0192400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : GRIM-19 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.012) R2 : 0.606
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.753 (0.0287) R2dC : 0.6 R2C : 0.596
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0778 (0.0252) R2dN8 : 0.0106 R2N8 : 0.00657
σ : 0.226
deviance : 23.28
__
_____
C
peak time of C : 11
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.87 0.199 10.7 -0.206 0.638 -0.473 0.571 0.238 -0.11 9.45 52.62 36 -- --
17.95 0.199 10.7 -0.196 0.616 -0.481 0.493 -- -0.111 9.38 52.62 36 -- --
18.81 0.204 10.7 -0.176 0.616 -0.465 -- -0.0839 -0.11 9.48 52.62 36 -- --
18.83 0.203 10.7 -0.178 0.616 -0.468 -- -- -0.11 9.47 52.62 36 -- --
39.27 0.293 10.7 -0.174 -- -0.604 -- -0.0204 -0.123 -- 60.34 16 -- --
21.67 0.218 10.7 -0.196 0.754 -- 0.429 -- -0.0992 10.9 -- -- -- --
22.44 0.222 10.7 -0.178 0.752 -- -- -- -0.0976 10.9 -- -- -- --
39.16 0.293 10.7 -0.176 -- -0.62 -- -- -0.121 -- 58.67 2 -- --
19.66 0.208 10.7 -- 0.616 -0.468 -- -- -0.0903 9.5 52.62 36 -- --
57.57 0.355 10.7 -0.195 -- -- -- -- -0.103 -- -- -- -- --
23.28 0.226 10.7 -- 0.753 -- -- -- -0.0778 11 -- -- -- --
39.97 0.295 10.7 -- -- -0.62 -- -- -0.103 -- 59 2 -- --
58.56 0.357 10.7 -- -- -- -- -- -0.0814 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.62 humidity 70 1440 > th dose dependent rect. 11 1
5 17.04 humidity 70 1440 > th dose dependent rect. 9 5
8 17.10 humidity 90 30 < th dose dependent rect. 11 23
11 17.19 humidity 90 1440 < th dose dependent rect. 11 1
21 17.49 humidity 80 1440 < th dose independent rect. 9 5
23 17.55 humidity 80 1440 > th dose independent rect. 9 5
26 17.56 humidity 50 30 > th dose dependent rect. 23 23
27 17.57 humidity 80 1440 > th dose independent rect. 10 2
29 17.59 humidity 80 1440 < th dose independent rect. 10 2
47 17.71 humidity 50 30 > th dose dependent rect. 21 23
61 17.81 radiation 20 1440 > th dose independent rect. 9 1
76 17.87 humidity 70 30 > th dose dependent rect. 23 21
78 17.88 humidity 90 30 < th dose dependent rect. 9 23
79 17.88 humidity 90 30 < th dose dependent rect. 22 23
87 17.90 humidity 50 30 > th dose dependent no NA NA
99 17.94 humidity 90 90 < th dose dependent rect. 19 23
106 17.97 humidity 90 30 < th dose dependent rect. 24 23
107 17.99 humidity 90 10 < th dose dependent rect. 5 23
112 18.00 humidity 90 10 < th dose dependent rect. 5 21
116 18.01 humidity 90 30 < th dose dependent no NA NA
119 18.01 humidity 90 30 < th dose dependent rect. 3 23
130 18.03 humidity 90 30 < th dose dependent rect. 24 21
152 18.05 humidity 60 90 > th dose dependent rect. 7 23
171 18.07 humidity 50 10 > th dose dependent rect. 17 23
182 18.09 humidity 60 30 > th dose dependent rect. 19 23
229 18.14 humidity 70 30 > th dose dependent rect. 23 19
232 18.14 humidity 60 30 > th dose dependent rect. 15 23
243 18.17 humidity 90 30 < th dose dependent sin 23 NA
245 18.17 humidity 90 30 < th dose dependent rect. 22 20
257 18.19 radiation 10 1440 > th dose dependent rect. 9 1
273 18.21 humidity 90 30 < th dose dependent rect. 24 18
288 18.22 humidity 90 30 < th dose dependent rect. 13 23
313 18.24 humidity 60 30 > th dose dependent rect. 13 23
319 18.25 humidity 80 30 > th dose dependent sin 22 NA
332 18.25 humidity 90 30 < th dose dependent rect. 15 23
355 18.27 humidity 90 30 < th dose dependent rect. 3 15
364 18.27 humidity 90 30 < th dose dependent rect. 17 23
366 18.28 humidity 80 90 > th dose independent rect. 9 10
368 18.28 humidity 90 30 < th dose dependent rect. 5 13
430 18.32 humidity 50 30 > th dose dependent sin 0 NA
446 18.32 humidity 60 30 > th dose dependent rect. 1 23
449 18.33 radiation 20 1440 < th dose independent rect. 9 1
480 18.34 humidity 60 30 > th dose dependent rect. 11 23
497 18.35 humidity 60 90 > th dose dependent rect. 9 23
511 18.36 humidity 80 90 > th dose dependent rect. 7 12
533 18.37 humidity 90 30 < th dose dependent rect. 11 21
544 18.38 radiation 40 1440 < th dose dependent rect. 9 1
563 18.40 radiation 10 720 > th dose independent rect. 9 22
585 18.41 radiation 10 720 > th dose independent rect. 9 8
652 18.43 humidity 90 30 < th dose dependent rect. 9 19
691 18.45 humidity 90 30 < th dose dependent rect. 9 17
700 18.46 humidity 80 90 > th dose independent rect. 7 12
808 18.51 humidity 80 30 > th dose independent rect. 23 21
809 18.51 temperature 25 30 > th dose independent rect. 5 23
824 18.51 humidity 90 30 < th dose dependent rect. 9 14
827 18.52 radiation 10 720 > th dose independent sin 21 NA
855 18.52 humidity 60 90 > th dose dependent rect. 3 23
913 18.55 humidity 80 1440 < th dose independent sin 3 NA
937 18.56 humidity 80 720 < th dose independent sin 1 NA
969 18.56 humidity 90 30 < th dose dependent rect. 9 12