Os03g0185600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0185600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.67 | 0.31 | 10.2 | 1.05 | 1.52 | 0.911 | -0.375 | -0.627 | 0.096 | 17.4 | 24.1 | 16 | -- | -- |
| 43.82 | 0.311 | 10.2 | 1.12 | 1.55 | 0.846 | -0.422 | -- | 0.107 | 17.4 | 23.32 | 30 | -- | -- |
| 43.9 | 0.309 | 10.2 | 1.01 | 1.54 | 0.894 | -- | -0.771 | 0.0711 | 17.4 | 23.16 | 30 | -- | -- |
| 44.25 | 0.312 | 10.2 | 1.13 | 1.55 | 0.825 | -- | -- | 0.108 | 17.4 | 23.32 | 30 | -- | -- |
| 114.81 | 0.499 | 10.3 | 0.455 | -- | 2.24 | -- | -3.28 | -0.0951 | -- | 24.31 | 239 | -- | -- |
| 54.99 | 0.348 | 10.2 | 1.27 | 1.82 | -- | -0.121 | -- | 0.225 | 17 | -- | -- | -- | -- |
| 55.02 | 0.347 | 10.2 | 1.27 | 1.81 | -- | -- | -- | 0.224 | 17 | -- | -- | -- | -- |
| 120.08 | 0.51 | 10.2 | 0.89 | -- | 1.98 | -- | -- | -0.0161 | -- | 24.2 | 206 | -- | -- |
| 74.6 | 0.402 | 10.3 | -- | 1.42 | 1.15 | -- | -- | -0.0729 | 17.6 | 21.6 | 55 | -- | -- |
| 228.36 | 0.706 | 10.2 | 1.21 | -- | -- | -- | -- | 0.178 | -- | -- | -- | -- | -- |
| 97.77 | 0.463 | 10.2 | -- | 1.79 | -- | -- | -- | 0.0825 | 17 | -- | -- | -- | -- |
| 140.41 | 0.552 | 10.3 | -- | -- | 2.13 | -- | -- | -0.112 | -- | 24.12 | 207 | -- | -- |
| 266.81 | 0.762 | 10.2 | -- | -- | -- | -- | -- | 0.0438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 5 | 39.12 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 7 | 39.15 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 62 | 40.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 141 | 41.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 153 | 41.67 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 192 | 42.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 238 | 42.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 13 |
| 254 | 42.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 282 | 42.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 284 | 42.87 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 18 |
| 383 | 43.31 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 465 | 43.58 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 19 |
| 502 | 43.66 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 16 |
| 553 | 43.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 632 | 43.99 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 22 |
| 641 | 44.01 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 743 | 44.15 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 17 |
| 837 | 44.37 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 892 | 44.53 | temperature | 25 | 90 | > th | dose independent | sin | 23 | NA |
| 906 | 44.54 | temperature | 25 | 30 | > th | dose dependent | rect. | 3 | 15 |