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Os03g0185500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.3 (0.0277) R2 : 0.593
β1 : -1.85 (0.101) R2dD : 0.307 R2D : 0.195
β2 : 0.651 (0.0758) R2dC : 0.074 R2C : -0.0702
β3 : -1.09 (0.0654) R2dE : 0.279 R2E : 0.135
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.704 (0.0592) R2dN8 : 0.17 R2N8 : 0.0298
σ : 0.517
deviance : 123.39
__
_____
C
peak time of C : 4.84
E
wheather : radiation
threshold : 26.42
memory length : 35
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
116.43 0.507 7.31 -1.87 0.662 -1.1 -0.865 -0.85 -0.708 4.73 26.55 35 -- --
118.5 0.507 7.31 -1.83 0.706 -1.18 -1.21 -- -0.705 3.88 24.43 34 -- --
118.17 0.506 7.3 -1.85 0.646 -1.05 -- -1.05 -0.7 4.99 26.29 34 -- --
123.39 0.517 7.3 -1.85 0.651 -1.09 -- -- -0.704 4.84 26.42 35 -- --
136.37 0.547 7.3 -1.85 -- -0.827 -- -0.988 -0.628 -- 18.83 14 -- --
140.37 0.555 7.27 -1.84 0.982 -- 0.965 -- -0.635 9.95 -- -- -- --
143.76 0.561 7.27 -1.81 0.985 -- -- -- -0.635 9.7 -- -- -- --
140.16 0.554 7.3 -1.82 -- -0.836 -- -- -0.632 -- 17.09 8 -- --
213.01 0.68 7.26 -- 0.599 -1.08 -- -- -0.498 4.92 25.92 32 -- --
201.36 0.663 7.3 -1.82 -- -- -- -- -0.633 -- -- -- -- --
229.78 0.709 7.23 -- 0.989 -- -- -- -0.434 9.84 -- -- -- --
224.63 0.698 7.26 -- -- -0.815 -- -- -0.446 -- 10 8 -- --
288.3 0.793 7.25 -- -- -- -- -- -0.432 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 111.16 atmosphere 1000 10 > th dose independent rect. 24 23
4 114.22 atmosphere 1000 30 > th dose independent rect. 24 21
5 114.29 wind 9 14400 < th dose independent rect. 13 1
8 114.71 atmosphere 1000 270 > th dose independent rect. 14 14
16 115.14 wind 9 14400 > th dose independent rect. 13 1
18 115.27 atmosphere 1000 10 > th dose independent rect. 16 14
20 115.50 wind 9 14400 > th dose dependent rect. 13 1
21 115.51 atmosphere 995 720 > th dose independent rect. 24 19
29 115.95 radiation 20 10 < th dose dependent rect. 7 23
30 116.01 humidity 80 14400 < th dose dependent rect. 4 1
34 116.32 radiation 30 30 < th dose dependent rect. 11 23
54 116.76 radiation 30 30 < th dose dependent rect. 9 23
59 116.87 wind 9 14400 > th dose dependent rect. 22 17
65 116.94 radiation 30 30 < th dose dependent rect. 13 23
70 117.02 radiation 30 30 < th dose dependent no NA NA
73 117.06 radiation 30 30 < th dose dependent rect. 15 23
118 117.61 wind 1 43200 > th dose independent rect. 2 1
121 117.61 wind 9 14400 > th dose dependent rect. 3 12
132 117.75 atmosphere 1000 720 > th dose independent rect. 17 2
136 117.78 wind 9 14400 > th dose independent rect. 22 16
138 117.79 wind 1 43200 < th dose dependent rect. 16 10
139 117.80 humidity 80 14400 > th dose independent rect. 2 3
156 117.97 wind 1 43200 < th dose independent rect. 20 6
160 118.03 wind 1 43200 < th dose dependent rect. 18 8
164 118.07 humidity 80 14400 > th dose independent rect. 4 1
167 118.13 wind 9 14400 > th dose independent rect. 3 11
180 118.21 wind 1 43200 < th dose dependent rect. 20 2
184 118.23 temperature 25 4320 > th dose dependent rect. 17 15
194 118.31 wind 9 14400 < th dose independent rect. 2 12
198 118.33 wind 1 43200 < th dose dependent rect. 20 6
204 118.35 wind 9 14400 > th dose dependent rect. 10 5
210 118.40 wind 9 14400 < th dose independent rect. 22 16
215 118.43 wind 1 43200 < th dose independent rect. 18 8
231 118.50 humidity 80 14400 < th dose independent rect. 4 1
232 118.50 wind 1 14400 < th dose dependent rect. 9 2
255 118.60 temperature 25 270 > th dose dependent sin 12 NA
259 118.63 temperature 25 4320 > th dose dependent rect. 17 10
263 118.65 atmosphere 1000 720 > th dose independent rect. 22 14
296 118.74 radiation 40 270 < th dose independent rect. 9 10
301 118.77 wind 1 43200 < th dose independent rect. 2 1
304 118.77 atmosphere 995 720 > th dose independent rect. 7 21
310 118.82 atmosphere 995 720 > th dose independent rect. 15 6
311 118.82 atmosphere 1000 10 < th dose independent rect. 5 23
319 118.87 atmosphere 1000 10 < th dose independent rect. 9 23
320 118.88 atmosphere 1000 10 < th dose independent rect. 19 23
323 118.89 atmosphere 1000 10 < th dose independent rect. 11 23
324 118.89 atmosphere 1000 10 < th dose independent rect. 21 23
325 118.89 temperature 20 90 > th dose dependent rect. 16 11
327 118.91 atmosphere 1000 10 > th dose independent no NA NA
329 118.91 atmosphere 1000 10 < th dose independent no NA NA
330 118.91 atmosphere 1000 10 < th dose independent rect. 7 23
331 118.91 atmosphere 1000 10 < th dose independent rect. 13 23
337 118.95 atmosphere 1000 10 < th dose independent rect. 23 23
338 118.96 atmosphere 1000 10 < th dose independent rect. 3 23
341 118.97 atmosphere 1000 10 < th dose independent rect. 1 23
352 119.00 atmosphere 1000 10 < th dose independent rect. 15 23
361 119.04 atmosphere 1000 30 < th dose independent rect. 17 23
373 119.10 temperature 25 4320 > th dose dependent sin 11 NA
380 119.14 wind 1 43200 > th dose independent rect. 20 6
385 119.16 wind 1 43200 < th dose dependent rect. 23 2
405 119.24 atmosphere 995 720 > th dose independent rect. 17 10
411 119.25 radiation 10 90 < th dose independent rect. 7 23
428 119.33 wind 9 14400 > th dose independent rect. 9 5
442 119.38 radiation 30 30 < th dose dependent rect. 24 23
453 119.42 radiation 30 10 < th dose dependent rect. 11 19
459 119.44 wind 1 43200 > th dose independent rect. 18 8
462 119.44 temperature 20 10 > th dose dependent rect. 16 12
463 119.45 temperature 30 4320 > th dose independent sin 6 NA
470 119.47 temperature 30 4320 < th dose independent sin 7 NA
485 119.51 temperature 25 4320 > th dose dependent rect. 18 1
491 119.53 temperature 25 270 > th dose dependent rect. 16 14
534 119.68 atmosphere 1000 270 > th dose independent rect. 23 7
550 119.73 atmosphere 995 720 > th dose independent rect. 7 12
592 119.84 temperature 30 4320 > th dose independent rect. 9 6
649 119.95 radiation 30 30 < th dose dependent rect. 24 21
651 119.96 humidity 80 14400 < th dose independent rect. 21 9
699 120.10 wind 9 14400 > th dose independent sin 5 NA
701 120.10 wind 9 14400 > th dose dependent rect. 19 20
705 120.11 temperature 25 720 > th dose dependent rect. 15 19
719 120.16 atmosphere 1000 270 > th dose independent sin 16 NA
752 120.19 radiation 40 90 < th dose dependent rect. 9 12
777 120.29 wind 9 14400 > th dose independent rect. 19 21
839 120.43 atmosphere 1000 30 > th dose independent sin 14 NA
842 120.43 temperature 30 14400 > th dose dependent rect. 8 1
857 120.44 temperature 25 270 < th dose independent rect. 13 16
869 120.48 radiation 20 90 < th dose dependent rect. 24 19
881 120.52 wind 1 14400 < th dose independent rect. 9 2
883 120.53 wind 1 14400 > th dose independent rect. 9 2
904 120.57 wind 9 14400 > th dose independent rect. 19 19
937 120.66 temperature 25 90 > th dose independent rect. 16 11
947 120.67 wind 9 14400 > th dose dependent sin 5 NA
970 120.72 temperature 30 4320 < th dose independent rect. 24 15
981 120.73 temperature 10 90 > th dose dependent rect. 5 11
984 120.74 temperature 30 4320 < th dose independent rect. 2 13
997 120.76 temperature 30 4320 < th dose independent rect. 4 11