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Os03g0184600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : NAD-dependent epimerase/dehydratase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0212) R2 : 1.09e-07
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.000315 (0.0447) R2dN8 : 1.41e-07 R2N8 : 1.09e-07
σ : 0.4
deviance : 73.27
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_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.36 0.302 11.2 -0.531 0.472 -0.842 0.0485 0.0981 -0.187 0.788 60.11 1300 -- --
41.36 0.3 11.2 -0.537 0.473 -0.819 0.052 -- -0.187 0.784 60.49 1297 -- --
41.36 0.3 11.2 -0.528 0.471 -0.878 -- 0.175 -0.183 0.792 59.31 1298 -- --
41.38 0.3 11.2 -0.539 0.472 -0.815 -- -- -0.187 0.79 60.48 1298 -- --
54.26 0.343 11.2 -0.562 -- -0.596 -- -0.136 -0.171 -- 62.43 1496 -- --
51.42 0.336 11.2 -0.685 0.401 -- -0.0778 -- -0.0813 0.677 -- -- -- --
51.44 0.336 11.2 -0.682 0.401 -- -- -- -0.0809 0.671 -- -- -- --
54.25 0.343 11.2 -0.556 -- -0.611 -- -- -0.172 -- 63 1489 -- --
48.25 0.324 11.2 -- 0.486 -1.13 -- -- -0.135 0.753 56.99 1299 -- --
61.51 0.366 11.2 -0.668 -- -- -- -- -0.0738 -- -- -- -- --
63.71 0.373 11.2 -- 0.391 -- -- -- -0.00489 0.588 -- -- -- --
61.65 0.366 11.2 -- -- -0.954 -- -- -0.12 -- 57.31 1527 -- --
73.27 0.4 11.2 -- -- -- -- -- 0.000315 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.12 wind 7 4320 < th dose independent rect. 15 4
2 38.15 wind 7 4320 > th dose independent rect. 15 4
8 38.68 wind 7 4320 < th dose independent rect. 15 1
15 39.63 wind 5 4320 > th dose dependent rect. 15 5
21 39.82 wind 5 4320 > th dose dependent rect. 17 2
39 40.42 wind 5 4320 > th dose dependent rect. 15 1
88 41.40 humidity 60 1440 > th dose independent rect. 15 20
90 41.42 humidity 60 1440 < th dose dependent rect. 15 21
93 41.45 humidity 60 1440 < th dose independent rect. 15 20
141 41.83 wind 1 43200 < th dose dependent rect. 2 1
143 41.84 humidity 60 1440 < th dose dependent rect. 8 11
160 41.86 humidity 60 1440 < th dose dependent no NA NA
271 41.90 humidity 60 1440 < th dose dependent sin 20 NA
299 41.95 humidity 50 1440 > th dose independent rect. 2 15
302 41.97 humidity 50 1440 > th dose independent rect. 4 13
307 41.98 humidity 50 1440 > th dose independent rect. 21 20
316 42.01 humidity 50 1440 > th dose independent rect. 9 8
317 42.01 humidity 50 1440 > th dose independent rect. 6 11
360 42.09 wind 7 4320 < th dose independent rect. 13 18
367 42.12 humidity 60 1440 > th dose independent sin 11 NA
371 42.13 radiation 1 1440 < th dose independent rect. 9 5
372 42.13 radiation 1 1440 < th dose dependent rect. 9 5
397 42.15 wind 7 4320 > th dose independent rect. 13 18
399 42.16 humidity 60 1440 < th dose independent sin 10 NA
402 42.16 radiation 1 1440 > th dose independent rect. 9 4
431 42.20 humidity 50 1440 > th dose independent rect. 2 21
455 42.22 humidity 50 1440 > th dose independent rect. 4 19
459 42.22 humidity 50 1440 > th dose independent rect. 9 22
485 42.23 humidity 50 1440 > th dose independent rect. 4 23
490 42.24 humidity 50 1440 > th dose independent no NA NA
492 42.24 humidity 50 1440 > th dose independent rect. 6 17
493 42.24 humidity 50 1440 > th dose independent rect. 10 19
504 42.24 humidity 50 1440 > th dose independent rect. 6 23
513 42.25 humidity 50 1440 > th dose independent rect. 10 13
531 42.26 humidity 50 1440 > th dose independent sin 20 NA
598 42.28 humidity 60 1440 < th dose dependent rect. 13 6
612 42.29 radiation 30 4320 < th dose independent rect. 7 1
625 42.30 humidity 50 1440 > th dose independent rect. 13 4
640 42.32 radiation 30 4320 < th dose independent rect. 21 11
646 42.33 radiation 30 4320 < th dose independent rect. 2 6
653 42.33 humidity 70 1440 < th dose dependent sin 10 NA
661 42.34 humidity 70 1440 < th dose dependent rect. 17 18
663 42.35 radiation 1 1440 < th dose independent rect. 13 1
664 42.35 radiation 30 4320 < th dose independent rect. 24 8
667 42.35 radiation 1 1440 < th dose dependent rect. 13 1
671 42.36 humidity 60 1440 < th dose dependent rect. 14 3
694 42.39 humidity 80 14400 < th dose independent rect. 22 1
730 42.43 radiation 30 4320 < th dose independent rect. 4 4
745 42.45 humidity 50 1440 > th dose independent rect. 13 18
754 42.47 humidity 50 1440 > th dose independent rect. 13 10
757 42.47 humidity 50 1440 > th dose independent rect. 13 16
771 42.49 humidity 50 1440 > th dose independent rect. 13 14
792 42.53 humidity 50 1440 < th dose independent rect. 10 7
810 42.53 humidity 50 14400 > th dose dependent rect. 3 4
815 42.54 wind 5 4320 > th dose dependent rect. 13 17
818 42.55 radiation 30 4320 < th dose independent rect. 17 15
852 42.59 wind 9 43200 > th dose dependent rect. 13 4
869 42.62 humidity 50 1440 < th dose independent sin 17 NA
887 42.65 wind 9 43200 > th dose independent rect. 13 4
890 42.66 wind 7 4320 < th dose independent sin 18 NA
908 42.68 humidity 50 1440 < th dose independent no NA NA