Os03g0183500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF581 family protein.
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Os03g0183500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF581 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 586.66 | 1.14 | 7.32 | -5.02 | 1.91 | -2.9 | 1.89 | -1.96 | -0.762 | 6.17 | 1010 | 6015 | -- | -- |
| 595.18 | 1.14 | 7.37 | -5.39 | 1.9 | -2.81 | 2.02 | -- | -0.829 | 6.19 | 1011 | 5595 | -- | -- |
| 593.43 | 1.13 | 7.32 | -5.01 | 1.93 | -2.85 | -- | -2.1 | -0.767 | 5.85 | 1010 | 6246 | -- | -- |
| 602.71 | 1.14 | 7.33 | -5.53 | 1.94 | -2.54 | -- | -- | -0.773 | 5.8 | 1013 | 6641 | -- | -- |
| 784.94 | 1.3 | 7.36 | -4.85 | -- | -3.05 | -- | -1.92 | -0.696 | -- | 1010 | 5512 | -- | -- |
| 794.62 | 1.32 | 7.24 | -4.44 | 1.97 | -- | 1.61 | -- | -0.256 | 6.08 | -- | -- | -- | -- |
| 799.83 | 1.32 | 7.25 | -4.43 | 1.98 | -- | -- | -- | -0.264 | 5.82 | -- | -- | -- | -- |
| 787.55 | 1.31 | 7.44 | -5.3 | -- | -2.23 | -- | -- | -0.93 | -- | 1010 | 11145 | -- | -- |
| 1228.24 | 1.63 | 7.19 | -- | 1.93 | -2.19 | -- | -- | -0.0376 | 5.75 | 1014 | 4253 | -- | -- |
| 1003.86 | 1.48 | 7.28 | -4.37 | -- | -- | -- | -- | -0.217 | -- | -- | -- | -- | -- |
| 1316.84 | 1.7 | 7.14 | -- | 1.92 | -- | -- | -- | 0.23 | 5.93 | -- | -- | -- | -- |
| 1399.76 | 1.74 | 7.22 | -- | -- | -2.39 | -- | -- | 0.0314 | -- | 1014 | 4215 | -- | -- |
| 1507.18 | 1.81 | 7.17 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 582.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 583.24 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 3 | 583.36 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 5 | 583.71 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 6 | 583.75 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 7 | 583.76 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 40 | 585.50 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 56 | 586.17 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 64 | 586.39 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 82 | 586.81 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 134 | 587.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 165 | 588.43 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 204 | 588.68 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 21 | 8 |
| 231 | 588.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 232 | 588.83 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 8 | 20 |
| 237 | 588.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 238 | 588.84 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 5 | 20 |
| 309 | 589.13 | atmosphere | 1015.0 | 14400 | < th | dose independent | no | NA | NA |
| 312 | 589.19 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 327 | 589.24 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 358 | 589.47 | atmosphere | 1015.0 | 14400 | > th | dose independent | no | NA | NA |
| 377 | 589.58 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 386 | 589.64 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 426 | 589.98 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 472 | 590.41 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 474 | 590.43 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 690 | 592.36 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 701 | 592.49 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 705 | 592.52 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 712 | 592.58 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 7 | 6 |
| 716 | 592.63 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 717 | 592.64 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 719 | 592.65 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 721 | 592.66 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 725 | 592.69 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 727 | 592.69 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 738 | 592.76 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 740 | 592.77 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 744 | 592.81 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 745 | 592.82 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 756 | 592.87 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 2 | 16 |
| 759 | 592.90 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 763 | 592.91 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 8 | 4 |
| 771 | 592.94 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 3 | 13 |
| 779 | 592.96 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 2 | 16 |
| 790 | 593.00 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 832 | 593.17 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 945 | 593.89 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 988 | 594.16 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 6 |