Os03g0180000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Antihaemostatic protein domain containing protein.
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Os03g0180000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Antihaemostatic protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.83 | 0.168 | 11.4 | 0.358 | 0.0809 | -0.343 | 0.372 | -0.941 | 0.0682 | 17.9 | 80 | 710 | -- | -- |
| 13.87 | 0.173 | 11.3 | 0.45 | 0.084 | -0.466 | -0.0211 | -- | 0.0992 | 4.95 | 77 | 1086 | -- | -- |
| 12.64 | 0.166 | 11.4 | 0.347 | 0.095 | -0.404 | -- | -1.03 | 0.0757 | 6.37 | 76.6 | 1110 | -- | -- |
| 13.84 | 0.173 | 11.3 | 0.441 | 0.0959 | -0.457 | -- | -- | 0.0928 | 5.77 | 77.19 | 1095 | -- | -- |
| 13.03 | 0.168 | 11.4 | 0.369 | -- | -0.371 | -- | -0.854 | 0.0731 | -- | 76 | 914 | -- | -- |
| 16.78 | 0.192 | 11.4 | 0.401 | 0.158 | -- | 0.177 | -- | 0.071 | 9.19 | -- | -- | -- | -- |
| 16.89 | 0.192 | 11.4 | 0.407 | 0.158 | -- | -- | -- | 0.071 | 9.08 | -- | -- | -- | -- |
| 14.2 | 0.175 | 11.4 | 0.441 | -- | -0.431 | -- | -- | 0.091 | -- | 78 | 1025 | -- | -- |
| 18.36 | 0.2 | 11.4 | -- | 0.00565 | -0.482 | -- | -- | 0.0536 | 17.6 | 82.01 | 2041 | -- | -- |
| 18.32 | 0.2 | 11.4 | 0.406 | -- | -- | -- | -- | 0.0719 | -- | -- | -- | -- | -- |
| 21.25 | 0.216 | 11.4 | -- | 0.158 | -- | -- | -- | 0.0257 | 8.88 | -- | -- | -- | -- |
| 18.35 | 0.2 | 11.4 | -- | -- | -0.484 | -- | -- | 0.0591 | -- | 82 | 2049 | -- | -- |
| 22.68 | 0.222 | 11.4 | -- | -- | -- | -- | -- | 0.0268 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 11.65 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 11.65 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 11.86 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 6 | 11.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 7 | 11.95 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 8 | 11.95 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 9 | 11.96 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 12 | 11.98 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 18 | 12.02 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 26 | 12.06 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 36 | 12.09 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 39 | 12.10 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 46 | 12.12 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 13 |
| 51 | 12.13 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 60 | 12.14 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 64 | 12.15 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 80 | 12.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 84 | 12.17 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 89 | 12.18 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 96 | 12.19 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 16 |
| 105 | 12.20 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 186 | 12.32 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 192 | 12.32 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 243 | 12.37 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 20 |
| 244 | 12.37 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 274 | 12.40 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 12 |
| 307 | 12.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 335 | 12.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 340 | 12.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 359 | 12.48 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 362 | 12.49 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 391 | 12.52 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 398 | 12.52 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 414 | 12.53 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 422 | 12.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 432 | 12.55 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 456 | 12.57 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 467 | 12.58 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 479 | 12.59 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 486 | 12.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 497 | 12.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 513 | 12.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 523 | 12.62 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 524 | 12.62 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 527 | 12.62 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 590 | 12.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 637 | 12.67 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 667 | 12.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 671 | 12.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 675 | 12.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 685 | 12.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 691 | 12.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 705 | 12.71 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 709 | 12.71 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 722 | 12.72 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 730 | 12.72 | humidity | 80.0 | 720 | > th | dose independent | rect. | 3 | 21 |
| 744 | 12.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 747 | 12.73 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 772 | 12.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 18 |
| 793 | 12.74 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 2 | 22 |
| 794 | 12.75 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 802 | 12.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 815 | 12.76 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 817 | 12.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 873 | 12.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 876 | 12.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 889 | 12.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 921 | 12.79 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 945 | 12.80 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 957 | 12.80 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 974 | 12.81 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 995 | 12.82 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 2 |