BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0180000 Os03g0180000|J065046P13
(639 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54115.1 | chr1:20202118-20204052 FORWARD LENGTH=645 711 0.0
AT3G14070.1 | chr3:4661143-4663074 REVERSE LENGTH=644 698 0.0
AT5G17860.1 | chr5:5902638-5904350 REVERSE LENGTH=571 405 e-113
AT5G17850.1 | chr5:5899253-5900932 FORWARD LENGTH=560 234 1e-61
AT1G08960.1 | chr1:2879698-2881877 FORWARD LENGTH=547 122 4e-28
>AT1G54115.1 | chr1:20202118-20204052 FORWARD LENGTH=645
Length = 644
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/554 (62%), Positives = 425/554 (76%), Gaps = 1/554 (0%)
Query: 82 SVACAGVARHEGFGSQCEFLRAHPQCSSGGFVDYLGFFYCRCERFRVLGYAVLGVCLAAL 141
+V+C+G+ H G+ QCEFL+++P CS GF DYL FFYC C F++LGY +LGV L AL
Sbjct: 88 TVSCSGLHEHRGYADQCEFLKSNPICSPDGFFDYLKFFYCSCRDFKILGYILLGVWLVAL 147
Query: 142 FYMLGNTAADYFCCSLEKMSALLRLPPTVAGVTLLPFGNGAPDVFASIAAFMGTGAGDVG 201
FY+LGNTAADYFCCSLEK+S LLRLPPTVAGVTLLP GNGAPDVFASIAAF+G+ G+VG
Sbjct: 148 FYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGSDKGEVG 207
Query: 202 LNSXXXXXXXXXXXXXXXXSLCVAEKNVQIDRRCFVRDVGFFLMTLVALSIILIVGKVTV 261
LNS SLCVA+K V+ID++CF+RD+ FFL TLVAL +IL+VGKVTV
Sbjct: 208 LNSVLGGAVFVTCVVVGIVSLCVADKEVKIDKKCFIRDLSFFLFTLVALMVILMVGKVTV 267
Query: 262 WGAIMFVSIYVVYAFVVAANEVLRKHARRLKFDVVTPLLPVRGSIFAQGTXXXXXXXXXX 321
AI FVSIYV YA +VAANE+LRKH+RRLK D +TPLLP++GS+F+ +
Sbjct: 268 GIAIAFVSIYVFYASLVAANEILRKHSRRLKLDSITPLLPMQGSVFSSPSVEEDIPMYSP 327
Query: 322 XXXXXXGD-VAQINTSLPQWMWASHVAIYSNHGIRGGSPDSSRPLWGWSDEEVDNSTVSF 380
G+ +++ SLPQWMWA++VAIYSNH + D RP WGW+++ + +
Sbjct: 328 LMELDTGEGPPRLHDSLPQWMWATNVAIYSNHFAKANVHDEERPPWGWTEDGAEVESSLC 387
Query: 381 SKLFLFLELPLTIPRRLTIPIVEEDRWSKEYAVASAGLAPVLLAFLWSSQDGVSTKAHIA 440
SK+ LE PLT+PRRLTIP++EED WSK YAVAS LAPVLL+FLWSSQD S +A I
Sbjct: 388 SKITSLLETPLTVPRRLTIPLIEEDSWSKTYAVASVSLAPVLLSFLWSSQDDTSLQARIV 447
Query: 441 AYVIAGISGMALASLAFMFTDHERPPRRFLFPWVLGGFVMSIIWFYIIANELVALLVAFG 500
AY I G L LAF T+ +RPP+ +L PWVLGGF+MSI+WFY+IANELVALLV FG
Sbjct: 448 AYFIGIAIGSTLGYLAFKNTEPDRPPQIYLIPWVLGGFIMSIVWFYMIANELVALLVTFG 507
Query: 501 VILGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGIS 560
I GINPSILGLTVLAWGNSMGDL+SN+AL+MNGGDGVQIA+SGCYAGPMFNTL GLG+S
Sbjct: 508 GIYGINPSILGLTVLAWGNSMGDLVSNIALSMNGGDGVQIALSGCYAGPMFNTLVGLGMS 567
Query: 561 MLLGAWSTAPNSYVLPQDSSLIYTMSFLVGGLIWALVMLPRGGMQPNKILGVGLIALYSV 620
M LGAWS +P +Y++P+D+SL YT+ FL+ GLIW+LVMLPR M+PNK++G+GLI LY +
Sbjct: 568 MFLGAWSKSPETYMIPEDNSLFYTLGFLIFGLIWSLVMLPRNEMRPNKVMGIGLITLYLI 627
Query: 621 FLFIRVSNAMGILP 634
F+ R+S+AMG +P
Sbjct: 628 FVTFRLSSAMGFIP 641
>AT3G14070.1 | chr3:4661143-4663074 REVERSE LENGTH=644
Length = 643
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/553 (62%), Positives = 415/553 (75%), Gaps = 1/553 (0%)
Query: 82 SVACAGVARHEGFGSQCEFLRAHPQCSSGGFVDYLGFFYCRCERFRVLGYAVLGVCLAAL 141
+V C+G+ +H G+ QCEFL+A+P CS GF DYL FFYC C F +LGY +LGV L AL
Sbjct: 89 TVLCSGLHKHMGYADQCEFLKANPICSPDGFFDYLSFFYCSCRDFSILGYMMLGVWLVAL 148
Query: 142 FYMLGNTAADYFCCSLEKMSALLRLPPTVAGVTLLPFGNGAPDVFASIAAFMGTGAGDVG 201
FY+LGNTAADYFCCSLEK+S LLRLPPTVAGVTLLP GNGAPDVFASIAAF+GT G+VG
Sbjct: 149 FYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGTDKGEVG 208
Query: 202 LNSXXXXXXXXXXXXXXXXSLCVAEKNVQIDRRCFVRDVGFFLMTLVALSIILIVGKVTV 261
LNS SLCVA+K V+ID+ CF+RD+ FFL +LV+L +IL+VG+VTV
Sbjct: 209 LNSVLGGAVFVTSVVVGIVSLCVADKEVKIDKNCFIRDLSFFLFSLVSLLVILMVGRVTV 268
Query: 262 WGAIMFVSIYVVYAFVVAANEVLRKHARRLKFDVVTPLLPVRGSIFAQGTXXXXXXXXXX 321
AI FVSIYVVYAF+VAAN +LRKHA+R K + +TPLLP++GS+F+
Sbjct: 269 RIAIAFVSIYVVYAFLVAANVILRKHAKRFKLEALTPLLPMQGSVFSPSVGEDMPMNTPL 328
Query: 322 XXXXXXGDVAQINTSLPQWMWASHVAIYSNHGIRGGSPDSSRPLWGWSDEEVDNSTVSFS 381
++ SLPQWMWAS+VAIYSNH + D RP WGW D+ + + S +
Sbjct: 329 IETETEDGPPRLQ-SLPQWMWASNVAIYSNHFAKVSVHDEDRPPWGWIDDTAEVESSSCT 387
Query: 382 KLFLFLELPLTIPRRLTIPIVEEDRWSKEYAVASAGLAPVLLAFLWSSQDGVSTKAHIAA 441
K LE+PLTIPRRLTIP VEED WSK YAVAS LAPVLLA LWSSQD VS +A A
Sbjct: 388 KFTSLLEIPLTIPRRLTIPSVEEDTWSKTYAVASVSLAPVLLASLWSSQDDVSLQACGVA 447
Query: 442 YVIAGISGMALASLAFMFTDHERPPRRFLFPWVLGGFVMSIIWFYIIANELVALLVAFGV 501
Y + + G L LA+ T+ + PPRRFL PWVLGGF+MSI+WFY+IANELVALLV FG
Sbjct: 448 YFFSVVIGSTLGFLAYKNTEPDHPPRRFLIPWVLGGFIMSIVWFYMIANELVALLVTFGE 507
Query: 502 ILGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISM 561
I GINPSIL LTVLAWGNSMGDL+SN+AL MNGGDGVQIA+SGCYAGPMFNTL GLG+SM
Sbjct: 508 IYGINPSILALTVLAWGNSMGDLVSNIALTMNGGDGVQIALSGCYAGPMFNTLVGLGMSM 567
Query: 562 LLGAWSTAPNSYVLPQDSSLIYTMSFLVGGLIWALVMLPRGGMQPNKILGVGLIALYSVF 621
L GAWS +P++Y+LP+D SL YT+ FLV GL+WA+V+LPR MQP++ LGVGLIA+Y +F
Sbjct: 568 LFGAWSKSPDTYMLPEDKSLFYTLGFLVLGLVWAMVILPRNDMQPSRTLGVGLIAIYLIF 627
Query: 622 LFIRVSNAMGILP 634
+ R+S AMG +P
Sbjct: 628 VTFRLSCAMGFIP 640
>AT5G17860.1 | chr5:5902638-5904350 REVERSE LENGTH=571
Length = 570
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 332/555 (59%), Gaps = 40/555 (7%)
Query: 80 DPSVACAGVARHEGFGSQCEFLRAHPQCSSGGFVDYLGFFYCRCERFRVLGYAVLGVCLA 139
D G+A + S+C ++R+ +C G++DYL F+C + VLG+ VL L
Sbjct: 51 DSDSCSGGLASLDDHRSKCSYIRSQSKCGPQGYIDYLKIFFCIFGQSPVLGHLVLSAWLF 110
Query: 140 ALFYMLGNTAADYFCCSLEKMSALLRLPPTVAGVTLLPFGNGAPDVFASIAAFMGTGAGD 199
LFY+LG+TAA YFC SL+ +S +L+L PT+AGVTLL GNGAPD+F+S+ +F + GD
Sbjct: 111 VLFYLLGDTAASYFCPSLDSLSKVLKLSPTMAGVTLLSLGNGAPDLFSSVVSFTRSNNGD 170
Query: 200 VGLNSXXXXXXXXXXXXXXXXSLCVAEKNVQIDRRCFVRDVGFFLMTLVALSIILIVGKV 259
GLNS + + ++V IDR F+RDV F L+ L L +I+ +GKV
Sbjct: 171 FGLNSILGGAFFVSSFVVGTICVLIGSRDVAIDRNSFIRDVVFLLVALCCLGLIIFIGKV 230
Query: 260 TVWGAIMFVSIYVVYAFVVAANEVLRKHARRLKFDVVTPLLPVRGSIFAQGTXXXXXXXX 319
T+W A+ ++SIY++Y ++ + + R + +L R + G
Sbjct: 231 TIWVALCYLSIYLLYVGFLSVSHFFDRKKR-----MSDQILRSREDLAEMGVSLL----- 280
Query: 320 XXXXXXXXGDVAQINTSLPQWMWASHVAIYSNHGIRGGSPDSSRPLWGWSDEEVDNSTVS 379
G +A+ +LP+ ++ + SP R
Sbjct: 281 --------GYIAEEKLALPEKTTQEFKIVFED------SPKRHRS--------------C 312
Query: 380 FSKLFLFLELPLTIPRRLTIPIVEEDRWSKEYAVASAGLAPVLLAFLWSSQDGVSTKAHI 439
FS L + LPL +PRRLTIP+V E++WSK AV S +APVLL L+ S S + ++
Sbjct: 313 FSVLVSIIGLPLYLPRRLTIPVVCEEKWSKPCAVVSTAIAPVLLTELYCSHYSGSQR-NL 371
Query: 440 AAYVIAGISGMALASLAFMFTDHERPPRRFLFPWVLGGFVMSIIWFYIIANELVALLVAF 499
Y+I+G G+ + LA++ T+ PP++F W+LGGF MS+ W Y+IA ELV+LL++
Sbjct: 372 ILYIISGSIGLIVGILAYLTTEKSHPPKKFSLVWLLGGFTMSVTWTYMIAQELVSLLISL 431
Query: 500 GVILGINPSILGLTVLAWGNSMGDLMSNVALAMNGG-DGVQIAMSGCYAGPMFNTLAGLG 558
G I GI+PS+LGLTVLAWGNS+GDL++NV +A +GG DG QIA+SGCYAGP+FNT+ GLG
Sbjct: 432 GNIFGISPSVLGLTVLAWGNSLGDLIANVTVAFHGGNDGAQIALSGCYAGPLFNTVIGLG 491
Query: 559 ISMLLGAWSTAPNSYVLPQDSSLIYTMSFLVGGLIWALVMLPRGGMQPNKILGVGLIALY 618
+ +++ + + P Y++P D+SL+ T+ FL+ GL+WALV++P+ M+ +K++G GL+A+Y
Sbjct: 492 VPLVISSLAEYPGVYIIPSDNSLLETLGFLMVGLLWALVIMPKKKMRLDKLVGGGLLAIY 551
Query: 619 SVFLFIRVSNAMGIL 633
FL +R++ G+L
Sbjct: 552 LCFLSLRLARVFGVL 566
>AT5G17850.1 | chr5:5899253-5900932 FORWARD LENGTH=560
Length = 559
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 177/265 (66%), Gaps = 3/265 (1%)
Query: 370 DEEVDNSTVSFSKLFLF--LELPLTIPRRLTIPIVEEDRWSKEYAVASAGLAPVLLAFLW 427
D++ D+ + K + + LPL +PR LTIP+V ED+WSK AVAS APVLL+FLW
Sbjct: 292 DDDDDHQRYYYWKRLVIWAITLPLNLPRILTIPVVSEDKWSKPLAVASVTFAPVLLSFLW 351
Query: 428 SSQDGVSTKAHIAAYVIAGISGMALASLAFMFTDHERPPRRFLFPWVLGGFVMSIIWFYI 487
+ + ++ Y+I + G+AL +A T PP+++L PW+ GGFVMS+ W YI
Sbjct: 352 NWKRKPTSFEAGVVYLIGCLIGIALGFIAGATTKKLTPPKKWLLPWLAGGFVMSMTWSYI 411
Query: 488 IANELVALLVAFGVILGINPSILGLTVLAWGNSMGDLMSNVALAM-NGGDGVQIAMSGCY 546
A ELVALL + G I G++PSILGLTVLAWGNS+GDL++N+ +A+ +G +G Q+A+SGCY
Sbjct: 412 SAQELVALLTSLGYIFGVSPSILGLTVLAWGNSIGDLITNLTMALHDGNEGAQVAVSGCY 471
Query: 547 AGPMFNTLAGLGISMLLGAWSTAPNSYVLPQDSSLIYTMSFLVGGLIWALVMLPRGGMQP 606
AGP+FNTL LGIS++ AW P S V+ D L+ ++ FLV GL+W+ ++L M+
Sbjct: 472 AGPIFNTLFALGISLVGCAWEAYPLSIVIKTDPRLLESLGFLVAGLVWSFLVLFSNRMRL 531
Query: 607 NKILGVGLIALYSVFLFIRVSNAMG 631
++G+GL+ +Y L +R+ +G
Sbjct: 532 GGVMGIGLLVIYLASLSLRIMQTVG 556
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 130/211 (61%), Gaps = 10/211 (4%)
Query: 78 PVDPSV-------ACAGVARHEGFGSQCEFLRAHPQCSSGGFVDYLGFFYCRCERFRVLG 130
PVD S C+ + + S+C +L++ C+S GF DYL F YC E F +LG
Sbjct: 32 PVDSSALRPKSEHDCSALKHFHDYKSKCAYLKSIDPCASQGFFDYLSFLYCNFEGFPILG 91
Query: 131 YAVLGVCLAALFYMLGNTAADYFCCSLEKMSALLRLPPTVAGVTLLPFGNGAPDVFASIA 190
+L + L LFY+LG+TA++YFC SLE +S LL L PTVAGVTLL GNGAPD+FAS+
Sbjct: 92 QFLLFLWLLLLFYLLGHTASEYFCSSLESLSKLLNLSPTVAGVTLLSLGNGAPDLFASLV 151
Query: 191 AFMGTGAG--DVGLNSXXXXXXXXXXXXXXXXSLCVAEKNVQIDRRCFVRDVGFFLMTLV 248
+FMG G DVGLN+ S+ + ++ V+I+R F+RD+ FF +
Sbjct: 152 SFMGESKGTYDVGLNTVVGGSGFVTCVVVGIISISLHKRRVRIERAAFIRDICFFCAAIG 211
Query: 249 ALSIILIVGKVTVWGAIMFVSIYVVY-AFVV 278
+L++IL+ GK+ WGA+ F S+Y VY AFVV
Sbjct: 212 SLALILVYGKINFWGALGFCSLYAVYVAFVV 242
>AT1G08960.1 | chr1:2879698-2881877 FORWARD LENGTH=547
Length = 546
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 136/249 (54%), Gaps = 17/249 (6%)
Query: 388 ELPLTIPRRLTIPIVEEDRWSKEYAVASAGLAPVLLAFLWSSQDGVSTK---------AH 438
E P+++ LTIP WS+ Y A+ P A L++ V H
Sbjct: 298 ETPVSVLLNLTIPKPSPSEWSRFYRSANIVFCP--FALLYTCNSFVQLNHPISFLFPNTH 355
Query: 439 IAAYVIAGISGMALASLAFM-FTDHERPPRRFLFPWVLGGFVMSIIWFYIIANELVALLV 497
+ +++ +SLAF+ FT ++PP+ P ++ F+MS+ W IA EL+ L
Sbjct: 356 LPLWLVVL---FMTSSLAFLHFTVEKQPPKTEQLPVIVVAFIMSVFWISTIAGELLNCLA 412
Query: 498 AFGVILGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGL 557
A G +L + P++LGLTVLAWGNS+GDL+++VA+A G +AM+GC+AGPMFN L GL
Sbjct: 413 ALGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGRPA--MAMAGCFAGPMFNMLVGL 470
Query: 558 GISMLLGAWSTAPNSYVLPQDSSLIYTMSFLVGGLIWALVMLPRGGMQPNKILGVGLIAL 617
G ++++ + P++Y L ++ FL+ L+ +L+++ + + G+ L+ L
Sbjct: 471 GSALVMQTANVYPDAYKLGFHVGIVIAFVFLLLSLMGSLLVITWSRFRVPRFWGICLVGL 530
Query: 618 YSVFLFIRV 626
Y F F+ +
Sbjct: 531 YVAFTFVSL 539
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 96 SQCEFLRAHPQCSSGGFVDYLGFFYCRCERFRVLGYAVLGVCLAALFYMLGNTAADYFCC 155
S C R+H +GG ++Y YC +L + + FY+L TA +F
Sbjct: 61 SSCVSSRSH---DNGGVINYFSLHYCIFNENLFFSIPILSLLILLHFYILIKTAQTHFST 117
Query: 156 SLEKMSALLRLPPTVAGVTLLPFGNGAPDVFASIAAFMGTGAGDVGLNSXXXXXXXXXXX 215
K++ L L P++A VTLL GNGAPDVFAS+AA G G G +
Sbjct: 118 VTTKLADRLNLSPSMAAVTLLALGNGAPDVFASVAALRG-GQYRTGFGAILSAGTFVSAF 176
Query: 216 XXXXXSLCVAEKNVQIDRRCFVRDVGFFLMTLVALSIILIVGKVTVWGAIMFVSIYVVY 274
++ A +D FVRDV F+L+ + L + + G++ VW AI FV Y+ +
Sbjct: 177 VVGFVAIYAAP--FPVDAASFVRDVLFYLIAALFLFYVYLSGEIFVWQAIGFVGFYIFF 233
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.140 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,084,056
Number of extensions: 533104
Number of successful extensions: 1472
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1455
Number of HSP's successfully gapped: 8
Length of query: 639
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 534
Effective length of database: 8,227,889
Effective search space: 4393692726
Effective search space used: 4393692726
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 115 (48.9 bits)