Os03g0175800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0175800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 255.68 | 0.751 | 7.74 | -2.05 | 2.15 | 1.8 | 0.822 | -1.09 | -0.24 | 17 | 19.4 | 1771 | -- | -- |
| 256.58 | 0.746 | 7.7 | -1.77 | 2.14 | 1.81 | 0.764 | -- | -0.161 | 16.9 | 18.8 | 1857 | -- | -- |
| 257.32 | 0.747 | 7.73 | -2.04 | 2.15 | 1.81 | -- | -1.01 | -0.232 | 16.9 | 19.4 | 1838 | -- | -- |
| 258.04 | 0.748 | 7.7 | -1.77 | 2.14 | 1.81 | -- | -- | -0.159 | 16.9 | 18.78 | 1862 | -- | -- |
| 382.7 | 0.911 | 7.75 | -1.81 | -- | 2.04 | -- | -0.784 | -0.118 | -- | 20.37 | 358 | -- | -- |
| 336.89 | 0.86 | 7.62 | -1.1 | 2.25 | -- | 0.825 | -- | 0.239 | 17.1 | -- | -- | -- | -- |
| 338.6 | 0.862 | 7.61 | -1.1 | 2.25 | -- | -- | -- | 0.243 | 17.1 | -- | -- | -- | -- |
| 342.04 | 0.861 | 7.69 | -1.8 | -- | 3.07 | -- | -- | -0.265 | -- | 22.46 | 355 | -- | -- |
| 321.07 | 0.835 | 7.62 | -- | 1.78 | 1.54 | -- | -- | 0.141 | 16.5 | 21.7 | 566 | -- | -- |
| 604.23 | 1.15 | 7.59 | -1.18 | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
| 370.7 | 0.901 | 7.59 | -- | 2.27 | -- | -- | -- | 0.366 | 17.1 | -- | -- | -- | -- |
| 418.94 | 0.953 | 7.61 | -- | -- | 2.74 | -- | -- | 0.0949 | -- | 24.21 | 363 | -- | -- |
| 641.2 | 1.18 | 7.56 | -- | -- | -- | -- | -- | 0.318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 248.51 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 2 | 249.73 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 3 | 250.07 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 4 | 250.10 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 7 | 250.60 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 14 | 251.38 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 22 | 252.01 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 23 | 252.06 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 28 | 252.29 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 44 | 252.67 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 47 | 252.79 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 60 | 253.10 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 64 | 253.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 65 | 253.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 67 | 253.17 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 79 | 253.41 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 126 | 254.17 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 155 | 254.56 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 2 | 6 |
| 175 | 254.82 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 196 | 254.99 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 221 | 255.19 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 294 | 255.74 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 295 | 255.74 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 296 | 255.74 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 2 | 17 |
| 303 | 255.81 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 1 | 18 |
| 322 | 255.93 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 334 | 255.99 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 394 | 256.25 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 395 | 256.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 419 | 256.37 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 421 | 256.37 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 435 | 256.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 459 | 256.48 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 471 | 256.53 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 472 | 256.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 529 | 256.73 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 15 |
| 651 | 257.14 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 673 | 257.20 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 686 | 257.24 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 690 | 257.25 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 693 | 257.26 | humidity | 90.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 732 | 257.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 735 | 257.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 767 | 257.46 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 790 | 257.51 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 807 | 257.53 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 812 | 257.55 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 871 | 257.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 873 | 257.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 913 | 257.84 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 934 | 257.87 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 979 | 257.96 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 23 |