Os03g0174200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0174200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 362.09 | 0.894 | 3.24 | -0.145 | 0.422 | 1.13 | -0.694 | -3.61 | -0.132 | 5.8 | 20.5 | 228 | 3.37 | -- |
| 387.89 | 0.917 | 3.29 | -0.598 | 0.456 | 1.14 | -1.7 | -- | -0.265 | 4.72 | 20.5 | 223 | 2.44 | -- |
| 362.99 | 0.887 | 3.23 | -0.124 | 0.43 | 1.13 | -- | -3.88 | -0.13 | 5.78 | 20.5 | 225 | 3.24 | -- |
| 401.89 | 0.934 | 3.28 | -0.598 | 0.412 | 1.23 | -- | -- | -0.235 | 5.79 | 20.6 | 215 | 3.4 | -- |
| 371.28 | 0.897 | 3.24 | -0.0728 | -- | 1.28 | -- | -3.96 | -0.0884 | -- | 20.6 | 225 | 3.09 | -- |
| 414.18 | 0.954 | 3.33 | -0.808 | 0.644 | -- | -2.72 | -- | -0.412 | 4.66 | -- | -- | -- | -- |
| 433.65 | 0.975 | 3.32 | -0.792 | 0.63 | -- | -- | -- | -0.398 | 4.87 | -- | -- | -- | -- |
| 410.39 | 0.944 | 3.28 | -0.574 | -- | 1.32 | -- | -- | -0.19 | -- | 20.7 | 215 | 3.34 | -- |
| 411.37 | 0.945 | 3.26 | -- | 0.392 | 1.35 | -- | -- | -0.152 | 5.98 | 20.51 | 215 | 3.45 | -- |
| 454.58 | 0.996 | 3.32 | -0.769 | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
| 450.2 | 0.993 | 3.3 | -- | 0.616 | -- | -- | -- | -0.31 | 4.91 | -- | -- | -- | -- |
| 418.76 | 0.953 | 3.26 | -- | -- | 1.49 | -- | -- | -0.121 | -- | 20.6 | 219 | 3.11 | -- |
| 470.18 | 1.01 | 3.31 | -- | -- | -- | -- | -- | -0.296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 358.05 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 7 |
| 8 | 362.94 | humidity | 90 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 10 | 363.46 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 9 |
| 13 | 364.66 | humidity | 90 | 270 | < th | dose independent | rect. | 3 | 1 |
| 14 | 364.86 | temperature | 20 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 35 | 368.06 | humidity | 50 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 47 | 369.93 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 15 |
| 50 | 370.31 | temperature | 20 | 270 | < th | dose independent | sin | 10 | NA |
| 51 | 370.49 | temperature | 20 | 270 | > th | dose independent | sin | 10 | NA |
| 68 | 371.35 | radiation | 1 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 92 | 372.22 | humidity | 90 | 30 | < th | dose independent | rect. | 2 | 4 |
| 105 | 372.54 | humidity | 80 | 720 | < th | dose independent | rect. | 23 | 5 |
| 118 | 372.81 | humidity | 90 | 30 | < th | dose dependent | rect. | 2 | 4 |
| 120 | 372.91 | humidity | 80 | 270 | < th | dose independent | rect. | 1 | 2 |
| 159 | 373.91 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 8 |
| 184 | 374.70 | radiation | 1 | 270 | > th | dose independent | rect. | 4 | 1 |
| 209 | 374.88 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 211 | 374.91 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 250 | 375.72 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 6 |
| 305 | 376.51 | temperature | 20 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 307 | 376.56 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 332 | 377.00 | humidity | 80 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 388 | 377.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 9 |
| 399 | 377.99 | humidity | 80 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 408 | 378.15 | temperature | 20 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 443 | 379.31 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 2 |
| 489 | 380.10 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 507 | 380.54 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 1 |
| 539 | 380.85 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 2 |
| 543 | 380.88 | humidity | 50 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 550 | 381.08 | humidity | 90 | 30 | < th | dose independent | rect. | 2 | 7 |
| 568 | 381.33 | temperature | 25 | 270 | < th | dose dependent | sin | 10 | NA |
| 588 | 381.71 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 593 | 381.87 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 1 |
| 614 | 382.27 | temperature | 25 | 270 | < th | dose dependent | rect. | 18 | 13 |
| 637 | 382.59 | temperature | 25 | 90 | < th | dose dependent | sin | 8 | NA |
| 644 | 382.74 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 654 | 382.86 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 666 | 382.98 | radiation | 10 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 669 | 383.05 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 673 | 383.16 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 675 | 383.22 | humidity | 90 | 30 | < th | dose independent | rect. | 5 | 1 |
| 699 | 383.52 | temperature | 15 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 700 | 383.58 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 706 | 383.62 | humidity | 80 | 720 | < th | dose dependent | rect. | 19 | 13 |
| 710 | 383.66 | temperature | 15 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 718 | 383.70 | humidity | 50 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 729 | 383.83 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 3 |
| 732 | 383.86 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 733 | 383.86 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 745 | 383.94 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 17 |
| 774 | 384.22 | humidity | 50 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 801 | 384.39 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 15 |
| 822 | 384.54 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 847 | 384.71 | temperature | 10 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 849 | 384.72 | temperature | 10 | 43200 | < th | dose dependent | rect. | 9 | 11 |
| 862 | 384.81 | temperature | 10 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 873 | 384.82 | temperature | 10 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 892 | 384.93 | temperature | 20 | 10 | > th | dose independent | sin | 8 | NA |
| 895 | 384.96 | wind | 9 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 902 | 384.96 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 931 | 384.96 | wind | 9 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 938 | 384.96 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 1 |