Os03g0172400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor I25A and I25B, type 2 and phytocystatins domain containing protein.
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Os03g0172400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor I25A and I25B, type 2 and phytocystatins domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.21 | 0.534 | 3.16 | 0.272 | 0.256 | 0.981 | -0.235 | 0.499 | -0.00222 | 10.4 | 23.07 | 566 | -- | -- |
| 129.43 | 0.53 | 3.15 | 0.336 | 0.256 | 0.891 | -0.153 | -- | 0.015 | 10.2 | 23.36 | 589 | -- | -- |
| 129.39 | 0.53 | 3.16 | 0.282 | 0.259 | 0.962 | -- | 0.365 | 0.00153 | 10.2 | 23.1 | 573 | -- | -- |
| 129.51 | 0.53 | 3.15 | 0.326 | 0.259 | 0.885 | -- | -- | 0.0127 | 10.1 | 23.36 | 590 | -- | -- |
| 133.03 | 0.537 | 3.16 | 0.31 | -- | 1.06 | -- | 0.362 | 0.0227 | -- | 23.27 | 669 | -- | -- |
| 139.59 | 0.554 | 3.18 | 0.106 | 0.342 | -- | -0.168 | -- | -0.134 | 9.91 | -- | -- | -- | -- |
| 139.7 | 0.553 | 3.18 | 0.0991 | 0.344 | -- | -- | -- | -0.134 | 9.81 | -- | -- | -- | -- |
| 133.13 | 0.537 | 3.15 | 0.355 | -- | 0.92 | -- | -- | 0.0586 | -- | 25.09 | 694 | -- | -- |
| 131.98 | 0.535 | 3.16 | -- | 0.274 | 0.736 | -- | -- | -0.0408 | 9.89 | 23.44 | 584 | -- | -- |
| 146.74 | 0.566 | 3.19 | 0.0956 | -- | -- | -- | -- | -0.134 | -- | -- | -- | -- | -- |
| 139.96 | 0.553 | 3.18 | -- | 0.343 | -- | -- | -- | -0.145 | 9.79 | -- | -- | -- | -- |
| 136.05 | 0.543 | 3.16 | -- | -- | 0.777 | -- | -- | -0.0061 | -- | 25.1 | 680 | -- | -- |
| 146.98 | 0.566 | 3.19 | -- | -- | -- | -- | -- | -0.145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.03 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 2 | 124.13 | radiation | 40 | 90 | > th | dose dependent | sin | 12 | NA |
| 3 | 124.31 | humidity | 60 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 4 | 124.45 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 8 | 124.75 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 4 |
| 11 | 124.94 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 14 | 124.99 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 16 | 125.09 | humidity | 70 | 30 | < th | dose dependent | rect. | 9 | 2 |
| 18 | 125.13 | radiation | 30 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 29 | 125.52 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 55 | 125.52 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 81 | 125.57 | radiation | 40 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 85 | 125.68 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 10 |
| 89 | 125.69 | humidity | 60 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 103 | 125.72 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 8 |
| 106 | 125.75 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 15 |
| 123 | 125.79 | humidity | 60 | 30 | < th | dose independent | sin | 11 | NA |
| 132 | 125.84 | humidity | 60 | 10 | < th | dose independent | rect. | 16 | 18 |
| 186 | 126.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 187 | 126.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 190 | 126.13 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 194 | 126.14 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 295 | 126.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 7 |
| 297 | 126.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 355 | 126.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 3 |
| 357 | 126.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 6 |
| 360 | 126.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 11 |
| 377 | 126.67 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 11 |
| 378 | 126.68 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 388 | 126.71 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 9 | 2 |
| 391 | 126.72 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 425 | 126.80 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 2 |
| 488 | 126.90 | radiation | 40 | 90 | < th | dose independent | sin | 11 | NA |
| 549 | 126.96 | radiation | 40 | 90 | > th | dose independent | sin | 11 | NA |
| 570 | 127.00 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 8 |
| 617 | 127.06 | humidity | 60 | 10 | < th | dose dependent | sin | 11 | NA |
| 684 | 127.28 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 686 | 127.29 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 709 | 127.32 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 1 |
| 712 | 127.32 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 17 |
| 734 | 127.35 | radiation | 40 | 90 | > th | dose independent | rect. | 14 | 21 |
| 853 | 127.58 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 15 |
| 862 | 127.61 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 898 | 127.69 | radiation | 40 | 90 | > th | dose independent | rect. | 8 | 3 |
| 920 | 127.71 | wind | 1 | 10 | < th | dose independent | sin | 20 | NA |
| 928 | 127.74 | radiation | 1 | 720 | > th | dose independent | rect. | 4 | 1 |
| 941 | 127.74 | radiation | 1 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 956 | 127.76 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 958 | 127.77 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 970 | 127.81 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 3 |
| 971 | 127.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 1000 | 127.86 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |