Os03g0170600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0170600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 379.15 | 0.915 | 4.36 | -2.74 | 1.77 | 2.95 | -3.71 | 2.02 | -0.713 | 10.9 | 0.4318 | 1429 | -- | -- |
| 381.48 | 0.91 | 4.39 | -2.91 | 1.8 | 2.58 | -3.82 | -- | -0.724 | 10.8 | 0.4351 | 1423 | -- | -- |
| 433.82 | 0.97 | 4.35 | -2.85 | 1.96 | 3.06 | -- | 2.39 | -0.723 | 10.9 | 0.44 | 1406 | -- | -- |
| 440.7 | 0.978 | 4.39 | -3.12 | 1.79 | 2.73 | -- | -- | -0.761 | 10.7 | 0.45 | 1426 | -- | -- |
| 461.64 | 1.01 | 4.38 | -2.63 | -- | 1.21 | -- | -3.63 | -0.44 | -- | 0.41 | 1534 | -- | -- |
| 452.84 | 0.998 | 4.32 | -2.34 | 1.7 | -- | -4.01 | -- | -0.405 | 10.8 | -- | -- | -- | -- |
| 519.9 | 1.07 | 4.32 | -2.51 | 1.73 | -- | -- | -- | -0.42 | 10.7 | -- | -- | -- | -- |
| 528.85 | 1.07 | 4.42 | -3.57 | -- | 3.74 | -- | -- | -0.815 | -- | 0.58 | 1577 | -- | -- |
| 684.76 | 1.23 | 4.26 | -- | 1.52 | 0.197 | -- | -- | -0.142 | 10.6 | 0.45 | 1426 | -- | -- |
| 704.13 | 1.24 | 4.37 | -2.54 | -- | -- | -- | -- | -0.429 | -- | -- | -- | -- | -- |
| 685.71 | 1.22 | 4.26 | -- | 1.75 | -- | -- | -- | -0.141 | 10.8 | -- | -- | -- | -- |
| 721.87 | 1.26 | 4.3 | -- | -- | 1.17 | -- | -- | -0.143 | -- | 0.45 | 1426 | -- | -- |
| 874.49 | 1.38 | 4.3 | -- | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 356.27 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 357.11 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 3 | 357.53 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 4 | 357.88 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 8 |
| 12 | 358.57 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 10 |
| 13 | 358.59 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 5 |
| 14 | 358.60 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 16 | 358.72 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 42 | 359.56 | wind | 5 | 43200 | > th | dose dependent | sin | 19 | NA |
| 64 | 360.14 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 18 |
| 78 | 360.44 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 83 | 360.57 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 91 | 360.76 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 125 | 361.38 | wind | 5 | 43200 | > th | dose independent | sin | 21 | NA |
| 130 | 361.41 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 140 | 361.51 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 146 | 361.64 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 159 | 361.72 | wind | 5 | 43200 | < th | dose independent | sin | 21 | NA |
| 176 | 361.92 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 182 | 361.98 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 184 | 361.98 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 18 |
| 185 | 361.98 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 192 | 362.04 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 197 | 362.08 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 206 | 362.11 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 16 |
| 221 | 362.19 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 230 | 362.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 235 | 362.26 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 256 | 362.37 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 367 | 362.78 | wind | 9 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 379 | 362.82 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 417 | 362.99 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 9 |
| 449 | 363.10 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 463 | 363.14 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 477 | 363.18 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 492 | 363.25 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 530 | 363.39 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 537 | 363.41 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 538 | 363.41 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 10 |
| 588 | 363.56 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 776 | 364.34 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 856 | 364.65 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 996 | 365.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 9 |