Os03g0160200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0160200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.35 | 0.217 | 11.8 | 0.615 | 0.129 | -1.34 | 0.0644 | -1.96 | 0.467 | 6.7 | 21.53 | 5945 | -- | -- |
| 22.51 | 0.221 | 11.8 | 0.655 | 0.13 | -0.556 | 0.0501 | -- | 0.449 | 6.27 | 25.39 | 3156 | -- | -- |
| 21.36 | 0.215 | 11.8 | 0.616 | 0.129 | -1.33 | -- | -1.95 | 0.465 | 6.58 | 21.51 | 5943 | -- | -- |
| 22.5 | 0.221 | 11.8 | 0.657 | 0.129 | -0.556 | -- | -- | 0.449 | 6.66 | 25.4 | 3156 | -- | -- |
| 22.18 | 0.219 | 11.8 | 0.605 | -- | -1.48 | -- | -2.26 | 0.472 | -- | 21.07 | 5863 | -- | -- |
| 27.47 | 0.246 | 11.8 | 0.899 | 0.135 | -- | 0.00902 | -- | 0.591 | 6.35 | -- | -- | -- | -- |
| 27.47 | 0.245 | 11.8 | 0.899 | 0.135 | -- | -- | -- | 0.591 | 6.33 | -- | -- | -- | -- |
| 23.28 | 0.225 | 11.8 | 0.661 | -- | -0.556 | -- | -- | 0.451 | -- | 25.49 | 2938 | -- | -- |
| 23.32 | 0.225 | 11.9 | -- | 0.132 | -0.817 | -- | -- | 0.258 | 6.81 | 26.31 | 47520 | -- | -- |
| 28.41 | 0.249 | 11.8 | 0.903 | -- | -- | -- | -- | 0.594 | -- | -- | -- | -- | -- |
| 48.78 | 0.327 | 11.8 | -- | 0.148 | -- | -- | -- | 0.491 | 6 | -- | -- | -- | -- |
| 24.23 | 0.229 | 11.9 | -- | -- | -0.819 | -- | -- | 0.259 | -- | 26.3 | 47520 | -- | -- |
| 49.91 | 0.33 | 11.8 | -- | -- | -- | -- | -- | 0.494 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.29 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 20.36 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 5 | 20.49 | wind | 1 | 14400 | < th | dose dependent | rect. | 15 | 17 |
| 6 | 20.51 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 8 | 20.51 | wind | 1 | 14400 | < th | dose dependent | rect. | 15 | 21 |
| 23 | 20.58 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 24 | 20.58 | humidity | 70 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 25 | 20.59 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 30 | 20.60 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 34 | 20.61 | humidity | 50 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 37 | 20.62 | wind | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 42 | 20.63 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 16 |
| 62 | 20.68 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 63 | 20.68 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 64 | 20.69 | wind | 1 | 14400 | > th | dose independent | rect. | 15 | 21 |
| 66 | 20.69 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 67 | 20.70 | wind | 1 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 72 | 20.70 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 21 |
| 76 | 20.71 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 22 |
| 88 | 20.73 | wind | 1 | 14400 | < th | dose independent | rect. | 18 | 18 |
| 95 | 20.73 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 100 | 20.74 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 16 |
| 101 | 20.74 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 16 |
| 118 | 20.75 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 10 |
| 121 | 20.75 | wind | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 129 | 20.76 | wind | 1 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 138 | 20.76 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 21 |
| 144 | 20.77 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 145 | 20.77 | wind | 1 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 149 | 20.77 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 157 | 20.78 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 161 | 20.78 | wind | 1 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 199 | 20.81 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 201 | 20.81 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 21 |
| 219 | 20.82 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 235 | 20.84 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 242 | 20.85 | wind | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 248 | 20.85 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 264 | 20.86 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 272 | 20.87 | humidity | 50 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 273 | 20.87 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 274 | 20.87 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 310 | 20.89 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 323 | 20.90 | wind | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 335 | 20.90 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 345 | 20.91 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 358 | 20.91 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 373 | 20.92 | wind | 1 | 14400 | > th | dose independent | no | NA | NA |
| 376 | 20.92 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 382 | 20.92 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 390 | 20.93 | wind | 1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 399 | 20.93 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 431 | 20.95 | wind | 1 | 14400 | < th | dose independent | no | NA | NA |
| 461 | 20.97 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 463 | 20.97 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 490 | 20.98 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 11 |
| 525 | 21.00 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 592 | 21.03 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 659 | 21.06 | wind | 1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 669 | 21.06 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 676 | 21.07 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 724 | 21.08 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 14 |
| 729 | 21.09 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 730 | 21.09 | humidity | 50 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 743 | 21.09 | humidity | 50 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 759 | 21.09 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 20 |
| 784 | 21.10 | humidity | 50 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 832 | 21.11 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 914 | 21.14 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 971 | 21.16 | humidity | 50 | 43200 | < th | dose independent | sin | 5 | NA |
| 988 | 21.16 | wind | 1 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 989 | 21.16 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 11 |
| 991 | 21.16 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 14 |