Os03g0159900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0159900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.53 | 0.442 | 12.3 | -0.388 | 0.674 | -0.912 | -1.03 | -0.0294 | -0.551 | 13.1 | 91.68 | 624 | -- | -- |
| 88.53 | 0.438 | 12.3 | -0.39 | 0.673 | -0.912 | -1.04 | -- | -0.552 | 13.1 | 91.67 | 624 | -- | -- |
| 92.3 | 0.447 | 12.3 | -0.384 | 0.682 | -0.87 | -- | -0.446 | -0.532 | 13.5 | 91.97 | 650 | -- | -- |
| 92.78 | 0.449 | 12.3 | -0.413 | 0.695 | -0.853 | -- | -- | -0.537 | 13.6 | 92 | 650 | -- | -- |
| 115.49 | 0.501 | 12.3 | -0.401 | -- | -0.833 | -- | 0.148 | -0.509 | -- | 91.54 | 374 | -- | -- |
| 101.17 | 0.472 | 12.3 | -0.46 | 0.672 | -- | -0.81 | -- | -0.404 | 14.5 | -- | -- | -- | -- |
| 103.19 | 0.476 | 12.3 | -0.481 | 0.682 | -- | -- | -- | -0.408 | 14.9 | -- | -- | -- | -- |
| 115.39 | 0.5 | 12.3 | -0.432 | -- | -0.893 | -- | -- | -0.545 | -- | 91.74 | 378 | -- | -- |
| 97.57 | 0.46 | 12.3 | -- | 0.7 | -0.868 | -- | -- | -0.518 | 13.4 | 91.13 | 661 | -- | -- |
| 129.98 | 0.533 | 12.3 | -0.51 | -- | -- | -- | -- | -0.425 | -- | -- | -- | -- | -- |
| 109.29 | 0.489 | 12.3 | -- | 0.691 | -- | -- | -- | -0.354 | 14.9 | -- | -- | -- | -- |
| 120.24 | 0.511 | 12.3 | -- | -- | -0.922 | -- | -- | -0.503 | -- | 91.45 | 381 | -- | -- |
| 136.84 | 0.546 | 12.3 | -- | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.28 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 16 | 4 |
| 2 | 85.28 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 16 |
| 3 | 85.37 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 16 | 86.21 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 24 | 86.67 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 27 | 86.78 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 16 |
| 46 | 87.24 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 21 |
| 60 | 87.42 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 8 |
| 76 | 87.56 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 78 | 87.61 | temperature | 15.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 79 | 87.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 103 | 87.92 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 21 |
| 106 | 87.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 108 | 87.95 | temperature | 10.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 134 | 88.15 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 17 | 6 |
| 143 | 88.23 | radiation | 40.0 | 30 | < th | dose independent | rect. | 12 | 8 |
| 151 | 88.28 | radiation | 20.0 | 30 | < th | dose independent | rect. | 12 | 8 |
| 154 | 88.28 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 12 | 8 |
| 168 | 88.37 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 9 |
| 190 | 88.50 | radiation | 20.0 | 10 | < th | dose independent | rect. | 10 | 10 |
| 206 | 88.55 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 8 |
| 221 | 88.61 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 10 | 10 |
| 223 | 88.62 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 8 |
| 247 | 88.76 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 15 | 2 |
| 254 | 88.78 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 264 | 88.82 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 18 | 3 |
| 280 | 88.86 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 14 |
| 288 | 88.89 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 291 | 88.91 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 329 | 89.02 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 17 | 4 |
| 342 | 89.05 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 9 |
| 356 | 89.09 | temperature | 15.0 | 90 | > th | dose independent | rect. | 20 | 15 |
| 393 | 89.17 | wind | 7.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 394 | 89.17 | radiation | 10.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 401 | 89.19 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 8 |
| 403 | 89.19 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 12 | 8 |
| 405 | 89.19 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 16 |
| 406 | 89.19 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 16 |
| 412 | 89.21 | wind | 7.0 | 90 | < th | dose independent | rect. | 20 | 15 |
| 426 | 89.25 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 468 | 89.34 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 17 | 9 |
| 470 | 89.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 8 |
| 474 | 89.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 477 | 89.35 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 478 | 89.35 | radiation | 10.0 | 10 | < th | dose independent | rect. | 23 | 21 |
| 482 | 89.36 | radiation | 10.0 | 10 | < th | dose independent | rect. | 8 | 12 |
| 483 | 89.36 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 16 |
| 487 | 89.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 511 | 89.39 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 514 | 89.39 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 515 | 89.40 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 8 |
| 554 | 89.45 | humidity | 90.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 606 | 89.54 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 8 |
| 608 | 89.54 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 615 | 89.57 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 8 |
| 634 | 89.59 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 687 | 89.67 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 21 | 12 |
| 694 | 89.68 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 8 |
| 719 | 89.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 16 |
| 725 | 89.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 16 |
| 820 | 89.87 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 823 | 89.87 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 14 |
| 826 | 89.87 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 14 |
| 909 | 89.98 | wind | 5.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 917 | 89.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 14 |
| 978 | 90.06 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 987 | 90.07 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 9 |
| 997 | 90.08 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 999 | 90.08 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 16 | 15 |