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Os03g0155000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9 (0.0288) R2 : 0.796
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.06 (0.0687) R2dC : 0.405 R2C : 0.417
β3 : -2.29 (0.0898) R2dE : 0.323 R2E : 0.38
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.309 (0.0631) R2dN8 : 0.0155 R2N8 : 0.0498
σ : 0.534
deviance : 131.42
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C
peak time of C : 22.3
E
wheather : temperature
threshold : 21.1
memory length : 47520
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.64 0.512 8.89 2.06 2.03 -1.36 -0.328 0.797 0.838 22.6 23.66 418 -- --
119.29 0.509 8.87 2.16 2.03 -1.51 -0.372 -- 0.869 22.6 23.25 416 -- --
119.04 0.508 8.89 2.06 2.01 -1.33 -- 0.894 0.833 22.6 23.77 445 -- --
119.87 0.51 8.87 2.18 2.03 -1.52 -- -- 0.871 22.6 23.23 417 -- --
312.47 0.823 8.92 1.45 -- -2.38 -- 3.07 0.607 -- 47.17 810 -- --
147.19 0.569 8.82 2.52 2.08 -- -0.404 -- 1.1 22.4 -- -- -- --
147.85 0.569 8.82 2.54 2.09 -- -- -- 1.1 22.4 -- -- -- --
312.4 0.823 8.86 1.97 -- -2.39 -- -- 0.546 -- 29.5 753 -- --
131.42 0.534 9 -- 2.06 -2.29 -- -- 0.309 22.3 21.1 47520 -- --
413.78 0.95 8.76 2.57 -- -- -- -- 1.11 -- -- -- -- --
317.92 0.834 8.88 -- 2.1 -- -- -- 0.819 22.5 -- -- -- --
390.45 0.92 8.95 -- -- -2.34 -- -- 0.28 -- 21.59 47520 -- --
588.56 1.13 8.83 -- -- -- -- -- 0.823 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 118.82 precipitation 0.1 43200 > th dose dependent rect. 6 6
2 118.85 precipitation 0.1 43200 > th dose independent rect. 6 6
3 118.85 precipitation 0.1 43200 < th dose independent rect. 6 6
4 118.85 precipitation 0.1 43200 < th dose dependent rect. 6 6
5 118.97 wind 5.0 43200 > th dose independent rect. 9 1
6 119.00 humidity 90.0 14400 > th dose dependent rect. 5 2
11 119.06 radiation 30.0 4320 < th dose independent rect. 21 11
21 119.11 wind 3.0 43200 > th dose dependent rect. 9 1
22 119.12 precipitation 0.1 43200 > th dose dependent rect. 7 2
23 119.13 wind 5.0 43200 < th dose independent rect. 9 1
24 119.13 radiation 30.0 4320 < th dose independent rect. 7 1
25 119.13 precipitation 0.1 43200 > th dose independent rect. 7 2
26 119.15 radiation 30.0 4320 < th dose independent rect. 19 13
29 119.17 temperature 25.0 270 < th dose dependent rect. 18 18
31 119.24 precipitation 0.1 43200 < th dose independent rect. 7 2
32 119.24 radiation 30.0 4320 < th dose independent rect. 5 3
33 119.24 precipitation 0.1 43200 < th dose dependent rect. 7 2
36 119.33 radiation 30.0 4320 < th dose independent rect. 17 15
37 119.35 wind 9.0 43200 < th dose dependent rect. 8 1
67 119.57 humidity 90.0 14400 > th dose dependent rect. 4 11
83 119.68 humidity 90.0 14400 > th dose dependent rect. 3 13
88 119.73 wind 9.0 43200 > th dose independent rect. 6 12
96 119.79 precipitation 0.1 43200 < th dose independent rect. 1 7
98 119.79 precipitation 0.1 43200 < th dose dependent rect. 1 7
100 119.80 radiation 1.0 14400 > th dose independent rect. 6 1
103 119.81 wind 3.0 43200 < th dose independent rect. 19 5
112 119.84 wind 9.0 43200 > th dose independent rect. 21 21
115 119.86 wind 9.0 43200 > th dose independent rect. 1 17
118 119.87 radiation 1.0 14400 < th dose independent rect. 6 1
123 119.89 wind 3.0 43200 > th dose independent rect. 19 5
124 119.89 precipitation 0.1 43200 > th dose independent rect. 1 7
136 119.94 wind 9.0 43200 > th dose independent rect. 23 19
151 120.03 wind 9.0 14400 < th dose dependent rect. 21 3
170 120.12 wind 1.0 43200 > th dose dependent rect. 21 3
184 120.17 wind 1.0 43200 < th dose dependent rect. 5 21
212 120.26 wind 9.0 43200 < th dose independent rect. 6 12
215 120.27 wind 9.0 43200 < th dose independent rect. 20 22
225 120.31 humidity 90.0 14400 > th dose dependent sin 2 NA
253 120.38 wind 9.0 43200 < th dose dependent rect. 5 7
259 120.39 wind 9.0 43200 < th dose independent rect. 23 19
260 120.39 wind 1.0 43200 > th dose dependent rect. 22 1
265 120.39 wind 9.0 43200 > th dose dependent rect. 11 21
268 120.40 wind 9.0 43200 > th dose independent rect. 6 18
273 120.41 wind 9.0 43200 > th dose independent sin 1 NA
282 120.42 wind 9.0 43200 < th dose independent rect. 1 17
301 120.45 precipitation 0.1 43200 > th dose dependent rect. 1 7
360 120.55 wind 9.0 43200 > th dose independent rect. 1 23
369 120.56 wind 9.0 43200 > th dose independent rect. 15 23
396 120.60 wind 9.0 43200 > th dose independent rect. 11 23
420 120.63 wind 9.0 43200 > th dose independent rect. 23 23
433 120.65 wind 9.0 43200 > th dose independent no NA NA
454 120.68 wind 3.0 43200 > th dose independent rect. 6 6
490 120.73 wind 9.0 43200 < th dose independent rect. 6 18
509 120.75 wind 9.0 43200 > th dose independent rect. 13 23
523 120.77 wind 9.0 43200 < th dose independent rect. 15 23
540 120.79 wind 3.0 43200 > th dose dependent rect. 19 17
542 120.80 wind 5.0 14400 < th dose independent rect. 22 1
546 120.80 wind 3.0 43200 < th dose independent rect. 5 7
557 120.81 wind 9.0 43200 > th dose dependent sin 18 NA
559 120.82 wind 9.0 43200 > th dose independent rect. 9 5
562 120.83 wind 9.0 43200 < th dose independent sin 1 NA
571 120.83 wind 9.0 43200 < th dose independent rect. 6 21
603 120.87 wind 9.0 43200 > th dose independent rect. 17 23
614 120.90 wind 5.0 43200 > th dose independent rect. 22 1
625 120.91 wind 9.0 43200 < th dose independent rect. 1 23
632 120.92 wind 9.0 43200 < th dose independent rect. 6 16
641 120.93 wind 9.0 43200 < th dose dependent rect. 19 17
671 120.99 wind 7.0 43200 < th dose independent rect. 4 7
683 121.00 wind 9.0 43200 < th dose independent rect. 23 23
711 121.03 wind 9.0 43200 < th dose independent rect. 17 23
730 121.05 wind 9.0 43200 < th dose independent no NA NA
773 121.08 wind 7.0 43200 > th dose dependent rect. 21 17
825 121.14 wind 7.0 43200 < th dose independent rect. 21 15
845 121.16 wind 5.0 43200 < th dose independent rect. 18 9
863 121.17 wind 9.0 43200 < th dose independent rect. 11 23
876 121.18 wind 5.0 43200 > th dose independent rect. 18 17
887 121.19 radiation 1.0 14400 > th dose independent rect. 6 6
890 121.19 wind 5.0 43200 < th dose independent rect. 18 17
904 121.21 wind 7.0 43200 > th dose independent rect. 4 7
918 121.22 radiation 1.0 14400 < th dose independent rect. 6 6
958 121.25 radiation 1.0 14400 > th dose independent rect. 4 8
980 121.26 wind 5.0 43200 > th dose independent rect. 18 9
981 121.26 radiation 1.0 14400 < th dose independent rect. 22 14