Os03g0153900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aromatic-ring hydroxylase family protein.
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Os03g0153900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aromatic-ring hydroxylase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 204.93 | 0.673 | 3.71 | 0.683 | 0.9 | -1.55 | 0.561 | -3.61 | 0.439 | 5.6 | 1.048 | 4305 | -- | -- |
| 217.04 | 0.686 | 3.69 | 1.06 | 0.83 | -1.61 | 0.63 | -- | 0.573 | 5.58 | 1.66 | 2867 | -- | -- |
| 205.62 | 0.668 | 3.71 | 0.69 | 0.903 | -1.56 | -- | -3.62 | 0.437 | 5.6 | 1.044 | 4298 | -- | -- |
| 214.62 | 0.682 | 3.69 | 1.3 | 0.885 | -1.57 | -- | -- | 0.537 | 5.46 | 1.65 | 2837 | -- | -- |
| 221.25 | 0.693 | 3.67 | 0.703 | -- | -1.68 | -- | -3.39 | 0.461 | -- | 4.128 | 3547 | -- | -- |
| 253.85 | 0.747 | 3.69 | 1.17 | 0.866 | -- | 0.418 | -- | 0.316 | 5.94 | -- | -- | -- | -- |
| 254.27 | 0.747 | 3.69 | 1.18 | 0.868 | -- | -- | -- | 0.314 | 5.99 | -- | -- | -- | -- |
| 216.47 | 0.685 | 3.64 | 1.31 | -- | -1.99 | -- | -- | 0.616 | -- | 1.951 | 3663 | -- | -- |
| 262.15 | 0.754 | 3.69 | -- | 0.941 | -1.43 | -- | -- | 0.461 | 5.18 | 1.76 | 2817 | -- | -- |
| 293.36 | 0.8 | 3.71 | 1.2 | -- | -- | -- | -- | 0.334 | -- | -- | -- | -- | -- |
| 290.82 | 0.798 | 3.72 | -- | 0.886 | -- | -- | -- | 0.183 | 5.93 | -- | -- | -- | -- |
| 262.07 | 0.754 | 3.66 | -- | -- | -1.87 | -- | -- | 0.463 | -- | 2.147 | 3649 | -- | -- |
| 331.54 | 0.85 | 3.74 | -- | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 199.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 3 | 199.59 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 7 | 199.97 | temperature | 25 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 9 | 200.03 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 11 | 200.05 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 13 | 200.10 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 14 | 200.10 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 19 | 200.17 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 22 | 200.19 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 26 | 200.21 | humidity | 70 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 54 | 200.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 61 | 200.44 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 85 | 200.55 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 10 |
| 86 | 200.55 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 93 | 200.57 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 99 | 200.58 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 13 |
| 144 | 200.65 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 145 | 200.65 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 167 | 200.68 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 13 | NA |
| 211 | 200.72 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 1 | 20 |
| 329 | 200.80 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 16 | 23 |
| 334 | 200.81 | atmosphere | 1005 | 43200 | > th | dose dependent | no | NA | NA |
| 379 | 200.83 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 1 | 14 |
| 392 | 200.84 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 429 | 200.86 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 462 | 200.88 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 11 |
| 512 | 200.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 13 |
| 526 | 200.92 | temperature | 25 | 43200 | < th | dose dependent | sin | 18 | NA |
| 544 | 200.93 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 708 | 201.08 | temperature | 10 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 770 | 201.16 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 777 | 201.17 | humidity | 90 | 43200 | > th | dose dependent | sin | 19 | NA |