BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0153900 Os03g0153900|AK106420
(407 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38540.1 | chr4:18023187-18024827 FORWARD LENGTH=408 311 5e-85
AT5G05320.1 | chr5:1575093-1576679 REVERSE LENGTH=407 309 1e-84
AT2G35660.1 | chr2:14988499-14990320 FORWARD LENGTH=440 181 5e-46
AT4G15760.1 | chr4:8972785-8974548 REVERSE LENGTH=423 181 8e-46
AT2G29720.1 | chr2:12700592-12702289 REVERSE LENGTH=428 177 1e-44
AT4G15765.1 | chr4:8975783-8977211 REVERSE LENGTH=272 87 1e-17
>AT4G38540.1 | chr4:18023187-18024827 FORWARD LENGTH=408
Length = 407
Score = 311 bits (797), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/390 (44%), Positives = 236/390 (60%), Gaps = 20/390 (5%)
Query: 28 HRKGVKCSVLESSPELRASGFAFATWTNAWQALDNLGVGDKIRKLHLHLQELHVFSSSTG 87
HR G++ VLESS LRA+GFAF TW NAW+A++ LGV IR LH L+ V + S G
Sbjct: 26 HRLGIRSMVLESSETLRATGFAFTTWFNAWKAMEALGVSQHIRSLHDRLEGWVVGTISAG 85
Query: 88 EITRRADLTVQGKRGPNELRCVRRDWLLRALEEELPKGTIRYSSKIVAIEEDGNAKIIHL 147
T ++ + E RCV+R LL AL ELP+ TIR+SSK+V IE G K +HL
Sbjct: 86 --TPPTEMLFP-ESEEYESRCVQRKLLLEALAGELPEETIRFSSKVVHIELSGCYKKVHL 142
Query: 148 ADAAILRAKVLIGCDGVNSVVAKWLGLTKPSSSGRLATRGLAHYPDGHGLDPRFKMFVGH 207
+D IL+ KVL+GCDGV SVV KWLG P+++ RLA RGL H+P+GHG RF F G
Sbjct: 143 SDGTILKTKVLVGCDGVYSVVGKWLGFKNPATTARLAIRGLTHFPEGHGFGKRFFQFYGD 202
Query: 208 GFRAGVIPCNETDAYWFFTWSPSEHESNGVEE--SAEKMKQFVLTKLRSSKIPTEVLEVV 265
G R+G IPC+ YWF T H S ++E ++E +K+FVL K++ +P + VV
Sbjct: 203 GVRSGFIPCDHNTVYWFLT-----HTSTDIDEETNSEILKEFVLNKIKD--LPENIKNVV 255
Query: 266 ERSNINDVVXXXXXXXXXXXXXXXXISKGNACVAGDALHPMTPDLGQGGCAALEDGVVXX 325
E ++++ +V I+K N CVAGDALHPMTPD+GQGGC+A+EDGV+
Sbjct: 256 ETTDLDSMVMSQLKYRPPWELLWSNITKDNVCVAGDALHPMTPDIGQGGCSAMEDGVILA 315
Query: 326 XXXXXXXXXXXXXXES--------ERIEASLREYARIRRWRSVELVGTAYVVGIVQQSNN 377
E+ +RIE L++YA R+WRS++L+ TAY VG +QQS
Sbjct: 316 RCLGEAIKAKSLKGETEENEEEGYKRIEEGLKKYAGERKWRSIDLITTAYTVGFIQQSRG 375
Query: 378 AVISFLRDKWLAGVLAGRLLKMADYDCGKL 407
++ RD++L+ L+ LLK + +DCG L
Sbjct: 376 KWMNMFRDRFLSSYLSRMLLKKSHFDCGSL 405
>AT5G05320.1 | chr5:1575093-1576679 REVERSE LENGTH=407
Length = 406
Score = 309 bits (792), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 236/387 (60%), Gaps = 16/387 (4%)
Query: 28 HRKGVKCSVLESSPELRASGFAFATWTNAWQALDNLGVGDKIRKLHLHLQELHVFSSSTG 87
HR G++ VLESS +LRA+GFA + + NAW+A++ LG+ IR L Q V S G
Sbjct: 26 HRLGIRSIVLESSEQLRATGFALSLYFNAWKAMEALGISQHIRSLGDRFQGWVVRPISAG 85
Query: 88 EITRRADLTVQGKRGPNELRCVRRDWLLRALEEELPKGTIRYSSKIVAIEEDGNAKIIHL 147
+ + + E+RCV+R LL AL ELP+GTIR+SSK+V IE G+ K++HL
Sbjct: 86 DPPKEMLFP---ESEEYEVRCVQRKLLLDALAGELPQGTIRFSSKLVHIELSGHYKMVHL 142
Query: 148 ADAAILRAKVLIGCDGVNSVVAKWLGLTKPSSSGRLATRGLAHYPDGHGLDPRFKMFVGH 207
+D IL+ KVL+GCDGV SVV KWLG P + R+A RG+AH+ GH L RF F G+
Sbjct: 143 SDGTILKTKVLVGCDGVKSVVGKWLGFKNPVKTSRVAIRGIAHFQTGHELGRRFFQFYGN 202
Query: 208 GFRAGVIPCNETDAYWFFTWSPSEHESNGVEESAEKMKQFVLTKLRSSKIPTEVLEVVER 267
G R+G I C++ YWF T + ++ + +++ +K+KQFVLTK++ +P + ++E
Sbjct: 203 GVRSGFISCDQNTVYWFLTHTSTDLD----KKNHQKIKQFVLTKIKD--LPDNIKSILET 256
Query: 268 SNINDVVXXXXXXXXXXXXXXXXISKGNACVAGDALHPMTPDLGQGGCAALEDGVVXXXX 327
++++ +V I+K N CVAGDALHPMTPD+GQGGC+A+EDGV+
Sbjct: 257 TDLDSLVMNPLMYRPPWELLWANIAKDNVCVAGDALHPMTPDIGQGGCSAMEDGVILARC 316
Query: 328 XXXXXXXXXXXXESE-------RIEASLREYARIRRWRSVELVGTAYVVGIVQQSNNAVI 380
E+E RIE L++YA R+WRS++L+ T+Y VG +QQS +
Sbjct: 317 LGEAMKAKNMKGETEDENESYRRIEDGLKKYAGSRKWRSIDLITTSYTVGFIQQSRGKWM 376
Query: 381 SFLRDKWLAGVLAGRLLKMADYDCGKL 407
+ RDK+++ L+ +K + ++CG+L
Sbjct: 377 TLFRDKFMSSFLSWLRVKKSHFNCGRL 403
>AT2G35660.1 | chr2:14988499-14990320 FORWARD LENGTH=440
Length = 439
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 15/383 (3%)
Query: 28 HRKGVKCSVLESSPELRASGFAFATWTNAWQALDNLGVGDKIRKLHLHLQELHVFSSSTG 87
HR G++ VLE + LR G + + N W+ LD + VG ++R L ++ + V
Sbjct: 64 HRLGIRSVVLEQAESLRTGGTSLTLFKNGWRVLDAISVGPQLRTQFLEIEGMVVKKEDGR 123
Query: 88 EITRRADLTVQGKRGPNELRCVRRDWLLRALEEELPKGTIRYSSKIVAIEEDGNA-KIIH 146
E+ + E+R V R LL L +LP TIR+SSK+ +I+ + N ++
Sbjct: 124 ELR---SFKFKDDDQSQEVRAVERRVLLETLASQLPPQTIRFSSKLESIQSNANGDTLLQ 180
Query: 147 LADAAILRAKVLIGCDGVNSVVAKWLGLTKPSSSGRLATRGLAHYPDGHGLDPRFKMFVG 206
L D L A+++IGCDG+ S VA W+G ++P G A RGL YP+G + G
Sbjct: 181 LGDGTRLLAQIVIGCDGIRSKVATWMGFSEPKYVGHCAYRGLGFYPNGQPFQKKVNYIYG 240
Query: 207 HGFRAGVIPCNETDAYWFFTWSPSEHESNGVEESAEKMKQFVLTKLRSSKIPTEVLEVVE 266
G RAG +P + T YWF ++ S + + A KQ K S P ++ +++
Sbjct: 241 KGIRAGYVPVSTTKVYWFICFN-SPSLGPKITDPAILKKQ---AKELVSTWPEDLQNLID 296
Query: 267 RSNINDVVXXXXXXXXXXXXXXXXISKGNACVAGDALHPMTPDLGQGGCAALEDGVVXXX 326
+ + SKG + GDA HPMTP+LGQG C ALED VV
Sbjct: 297 LTPDETISRTPLVDRWLWPGIAPPASKGRVVLVGDAWHPMTPNLGQGACCALEDSVVLAN 356
Query: 327 XXXXXXXXXXXXXESERIEASLREYARIRRWRSVELVGTAYVVGIVQQSNNAVISFLRDK 386
+E IE ++ Y R R+ L A +VG + Q N ++ +R+
Sbjct: 357 KLANAINGG-----TESIEVAMESYGSERWSRAFPLTVRANLVGALLQWENPLVCSIRNN 411
Query: 387 WLAGVL--AGRLLKMADYDCGKL 407
+ L G +L+ +++C L
Sbjct: 412 IVIPKLLRLGPMLEHTNFECEPL 434
>AT4G15760.1 | chr4:8972785-8974548 REVERSE LENGTH=423
Length = 422
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 187/387 (48%), Gaps = 19/387 (4%)
Query: 28 HRKGVKCSVLESSPELRASGFAFATWTNAWQALDNLGVGDKIRKLHLHLQELHVFSSSTG 87
HRKG+K VLE + ++R+ G T +N W+ALD LGVGD++R L+ +H +
Sbjct: 48 HRKGIKSVVLERAEKVRSEGAGIGTLSNGWRALDQLGVGDRLR---LNSSLIHKARTMLI 104
Query: 88 EITRRADLTVQGKRGPNELRCVRRDWLLRALEEELPKGTIRYSSKIVAIEEDGNA--KII 145
E ++ + +E RC++R+ L+ AL + LPKGTIR+ S IV+IE+D ++
Sbjct: 105 ENGKKREFV---SNIVDEARCIKRNDLVEALSDALPKGTIRFGSHIVSIEQDKTTLFPVV 161
Query: 146 HLADAAILRAKVLIGCDGVNSVVAKWLGLTKPSSSGRLATRGLAHYPDGHGLDPRFKMFV 205
HLA+ ++AKVLIGCDG NS+V+ +L L + A RG YP+GHG P+ + +
Sbjct: 162 HLANGNSIKAKVLIGCDGANSIVSDYLQLNPKKAFACRAVRGFTKYPNGHGF-PQEVLRI 220
Query: 206 GHG-FRAGVIPCNETDAYWFFTWSPSEHESNGVEESAEKMKQFVLTKLRSSKIPTEVLEV 264
G G +P + +WF + + +ES L + + + + E+
Sbjct: 221 KQGNVLIGRLPLTDNQVFWFLVHMQDNNHNGKDQESIAN-----LCRKWADDLSEDWKEM 275
Query: 265 VERSNINDVVXXXXXXXXXXXXXXXXISKGNACVAGDALHPMTPDLGQGGCAALEDGVVX 324
V+ N+ + +G VAGDA+H M P L QGG AALED VV
Sbjct: 276 VKICNVESLTLTHLRYRAPSEIMLGKFRRGTVTVAGDAMHVMGPFLAQGGSAALEDAVVL 335
Query: 325 XXXXXXXX----XXXXXXXESERIEASLREYARIRRWRSVELVGTAYVVGIVQQSNNAVI 380
+ IE ++ EY RR R + L Y+ G Q+++ V+
Sbjct: 336 ARCLARKVGPDHGDLLKDCSMKNIEEAIDEYVDERRMRLLGLSVQTYLTGRSLQTSSKVL 395
Query: 381 SFLRDKWLAGVLAGRLLKMADYDCGKL 407
+ L + ++ YDCG+L
Sbjct: 396 RLMFIALLLLLFGRDQIRHTRYDCGRL 422
>AT2G29720.1 | chr2:12700592-12702289 REVERSE LENGTH=428
Length = 427
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 168/363 (46%), Gaps = 21/363 (5%)
Query: 28 HRKGVKCSVLESSPELRASGFAFATWTNAWQALDNLGVGDKIRKLHLHLQELHVFSSSTG 87
HR G++ VLE + LR G + N W+ LD + +G ++RK L +Q + V G
Sbjct: 62 HRLGIRSVVLEQAESLRTGGASLTLSKNGWRVLDAISIGPQLRKQFLEMQGV-VLKKEDG 120
Query: 88 EITRRADLTVQGKRGPNELRCVRRDWLLRALEEELPKGTIRYSSKIVAIEEDGNA-KIIH 146
R + E+R V R LL L +LP TIR+SSK+ +I+ + N ++
Sbjct: 121 RELR--SFKFKDNDQSQEVRGVERRVLLETLASQLPPQTIRFSSKLESIQSNANGDTLLQ 178
Query: 147 LADAAILRAKVLIGCDGVNSVVAKWLGLTKPSSSGRLATRGLAHYPDGHGLDPRFKMFVG 206
L D A ++IGCDG+ S VA W+G ++P G A RGL +P+G + G
Sbjct: 179 LKDGTRFLANIVIGCDGIRSKVATWMGFSEPKYVGYCAFRGLGFFPNGQPFQQKVNYIFG 238
Query: 207 HGFRAGVIPCNETDAYWFFTWSPSEHESNGVEESAEKMKQFVLTKLRS---SKIPTEVLE 263
G RAG +P + T YWF T+ N + M +L K S P ++
Sbjct: 239 RGLRAGYVPVSATKVYWFITF-------NSPSLGPQMMDPAILRKEAKELVSTWPEDLQN 291
Query: 264 VVERSNINDVVXXXXXXXXXXXXXXXXISKGNACVAGDALHPMTPDLGQGGCAALEDGVV 323
+++ + + SKG + GDA HPMTP+LGQG C ALED V+
Sbjct: 292 LIDLTPDEAISRTPLADRWLWPGIAPSASKGRVVLVGDAWHPMTPNLGQGACCALEDSVL 351
Query: 324 XXXXXXXXXXXXXXXXESERIEASLREYARIRRWRSV-ELVGTAYVVGIVQQSNNAVISF 382
+E +E ++ Y R RW V L A +VG + QS+N ++
Sbjct: 352 LANKLASAINGG-----TESVEGAMESY-RSERWSQVFRLTVLANLVGKLLQSDNPLVCS 405
Query: 383 LRD 385
+RD
Sbjct: 406 VRD 408
>AT4G15765.1 | chr4:8975783-8977211 REVERSE LENGTH=272
Length = 271
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 99/228 (43%), Gaps = 44/228 (19%)
Query: 28 HRKGVKCSVLESSPELRASGFAFATWTNAWQALDNLGVGDKIRKLHLHLQELHVFSSSTG 87
HRKG+K VLE S +R+ G AF W IR + +
Sbjct: 23 HRKGIKSVVLERSESVRSEGAAF------W-----------IRDVLIE-----------K 54
Query: 88 EITRRADLTVQGKRGPNELRCVRRDWLLRALEEELPKGTIRYSSKI--VAIEEDGNAKII 145
I RR + G E+R V R+ L+RAL LP GT+R I V ++E + I+
Sbjct: 55 GIKRRESV---GPASYGEVRGVLRNDLVRALAHALPLGTLRLGCHILSVKLDETKSFPIV 111
Query: 146 HLADAAILRAKVLIGCDGVNSVVAKWLGLTKPSSSGRLATRGLAHYPDGHGLDPRFKMFV 205
H VLIGCDG NSVV+++LGL G A RG +YPD HG F
Sbjct: 112 H----------VLIGCDGSNSVVSRFLGLNPTKDLGSRAIRGFTNYPDDHGFRQEFIRIK 161
Query: 206 GHGFRAGVIPCNETDAYWFFTWSPSEHESNGVEESAEKMKQFVLTKLR 253
+G +P +WF +SN + ++ E + + L +R
Sbjct: 162 MDNVVSGRLPITHKLVFWFVVLRNCPQDSNFL-KNQEDIARLALASVR 208
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,866,313
Number of extensions: 303205
Number of successful extensions: 643
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 623
Number of HSP's successfully gapped: 6
Length of query: 407
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 306
Effective length of database: 8,337,553
Effective search space: 2551291218
Effective search space used: 2551291218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)