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Os03g0153500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Aromatic-ring hydroxylase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.33 (0.045) R2 : 0.742
β1 : 1.9 (0.165) R2dD : 0.0787 R2D : 0.0328
β2 : 3.97 (0.121) R2dC : 0.752 R2C : 0.29
β3 : -2.19 (0.094) R2dE : 0.374 R2E : -0.102
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.497 (0.0959) R2dN8 : 0.0204 R2N8 : 0.00211
σ : 0.84
deviance : 325.53
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_____
C
peak time of C : 9.84
E
wheather : wind
threshold : 4.903
memory length : 739
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 7.18
open length of G : 1.45

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
324.08 0.846 9.33 1.91 3.95 -2.2 1.04 -0.616 0.52 9.87 4.885 735 7.17 1.63
324.74 0.839 9.33 1.97 3.93 -2.16 0.483 -- 0.54 9.8 4.844 739 7.2 1.5
325.94 0.841 9.34 1.91 3.94 -2.18 -- -0.115 0.504 9.84 4.9 739 7.17 1.55
325.53 0.84 9.33 1.9 3.97 -2.19 -- -- 0.497 9.84 4.903 739 7.18 1.45
746.84 1.27 9.43 1.94 -- -2.46 -- -0.445 0.546 -- 5.588 1122 7.75 1.98
402.18 0.94 9.34 1.66 3.8 -- 0.82 -- 0.478 7.27 -- -- -- --
403.99 0.941 9.35 1.67 3.8 -- -- -- 0.477 7.27 -- -- -- --
680.35 1.21 9.4 1.85 -- -2.75 -- -- 0.59 -- 5.938 1006 8.53 3.27
421.7 0.956 9.35 -- 3.89 -2.02 -- -- 0.452 9.72 5.2 746 7.13 1.45
1171.28 1.6 9.43 1.74 -- -- -- -- 0.541 -- -- -- -- --
477.72 1.02 9.39 -- 3.82 -- -- -- 0.29 7.24 -- -- -- --
482.44 1.02 9.45 -- -- -3.48 -- -- 0.46 -- 8.8 619 10.9 6.85
1251.08 1.65 9.48 -- -- -- -- -- 0.348 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 329.97 wind 5.0 720 < th dose independent rect. 7 2
2 334.45 radiation 1.0 4320 > th dose independent rect. 17 2
12 335.25 temperature 15.0 270 > th dose dependent rect. 14 21
13 335.83 temperature 20.0 270 > th dose dependent rect. 15 19
16 337.06 radiation 1.0 4320 < th dose independent rect. 17 3
17 337.07 radiation 1.0 4320 < th dose independent rect. 17 9
19 337.09 radiation 1.0 4320 < th dose independent rect. 17 7
21 337.10 radiation 1.0 4320 < th dose independent rect. 17 11
24 337.14 wind 1.0 43200 < th dose dependent rect. 6 1
31 338.48 radiation 1.0 4320 < th dose dependent rect. 17 12
32 338.55 radiation 1.0 4320 < th dose dependent rect. 17 9
38 338.78 radiation 1.0 4320 < th dose dependent rect. 17 2
44 339.01 wind 1.0 43200 > th dose independent rect. 5 3
45 339.22 wind 1.0 43200 < th dose dependent rect. 5 3
46 339.25 wind 1.0 43200 < th dose independent rect. 15 9
47 339.54 wind 1.0 14400 < th dose independent rect. 21 2
54 340.38 radiation 10.0 14400 < th dose dependent rect. 11 2
60 340.57 wind 1.0 43200 < th dose dependent rect. 16 6
61 340.59 radiation 1.0 720 > th dose independent rect. 9 6
75 341.44 wind 1.0 43200 > th dose independent rect. 15 10
96 341.97 wind 1.0 14400 < th dose independent rect. 19 6
101 342.30 wind 1.0 14400 > th dose independent rect. 10 2
103 342.49 atmosphere 995.0 43200 < th dose independent rect. 1 8
104 342.49 atmosphere 995.0 43200 < th dose dependent rect. 3 5
105 342.60 atmosphere 995.0 43200 > th dose independent rect. 1 8
107 342.61 atmosphere 995.0 43200 > th dose independent rect. 4 4
109 342.62 atmosphere 995.0 43200 > th dose independent rect. 23 11
113 342.75 atmosphere 995.0 43200 < th dose independent rect. 23 11
117 342.79 atmosphere 995.0 43200 < th dose independent rect. 4 4
121 342.86 wind 1.0 14400 < th dose independent rect. 10 2
129 342.99 atmosphere 995.0 43200 > th dose independent rect. 21 14
133 343.01 atmosphere 995.0 43200 > th dose independent rect. 19 16
137 343.09 atmosphere 995.0 43200 < th dose independent sin 8 NA
138 343.09 wind 1.0 14400 > th dose independent rect. 21 2
140 343.16 atmosphere 995.0 43200 > th dose independent sin 8 NA
149 343.25 wind 1.0 43200 < th dose dependent rect. 13 11
153 343.28 atmosphere 995.0 43200 < th dose dependent sin 11 NA
154 343.30 atmosphere 995.0 43200 < th dose dependent rect. 21 12
173 343.57 precipitation 0.1 43200 < th dose independent rect. 1 1
174 343.57 precipitation 0.1 43200 < th dose dependent rect. 1 1
180 343.71 wind 1.0 14400 > th dose independent rect. 19 6
188 343.85 precipitation 0.1 43200 > th dose dependent rect. 21 6
197 343.97 precipitation 0.1 43200 > th dose independent rect. 1 1
199 343.97 precipitation 0.1 43200 > th dose dependent rect. 1 1
200 343.99 precipitation 0.1 43200 > th dose independent rect. 20 7
202 344.01 precipitation 0.1 43200 < th dose independent rect. 20 7
204 344.01 precipitation 0.1 43200 < th dose dependent rect. 20 7
208 344.08 wind 1.0 14400 < th dose dependent rect. 18 5
227 344.28 radiation 40.0 43200 > th dose independent rect. 7 1
244 344.28 radiation 40.0 43200 > th dose dependent rect. 7 1
289 344.80 temperature 25.0 30 > th dose dependent sin 10 NA
303 345.00 atmosphere 995.0 43200 < th dose dependent rect. 13 19
304 345.01 wind 9.0 720 < th dose dependent rect. 7 2
323 345.28 precipitation 0.1 43200 < th dose independent rect. 24 3
324 345.28 precipitation 0.1 43200 < th dose dependent rect. 24 3
339 345.36 temperature 25.0 270 > th dose independent rect. 14 20
343 345.47 precipitation 0.1 43200 > th dose independent rect. 12 1
344 345.47 precipitation 0.1 43200 > th dose dependent rect. 12 1
346 345.50 wind 1.0 43200 > th dose independent rect. 1 7
350 345.53 wind 1.0 43200 < th dose independent rect. 5 3
351 345.54 precipitation 0.1 43200 > th dose independent rect. 24 3
359 345.68 precipitation 0.1 43200 > th dose independent rect. 21 2
360 345.68 precipitation 0.1 43200 > th dose dependent rect. 24 3
375 345.93 precipitation 0.1 43200 < th dose independent rect. 21 2
377 345.93 precipitation 0.1 43200 < th dose dependent rect. 21 2
391 346.11 precipitation 0.1 43200 < th dose independent rect. 18 9
392 346.11 precipitation 0.1 43200 < th dose dependent rect. 18 9
393 346.12 atmosphere 995.0 43200 < th dose dependent rect. 13 14
401 346.23 precipitation 0.1 43200 > th dose independent rect. 18 9
405 346.25 atmosphere 995.0 43200 < th dose dependent sin 15 NA
406 346.30 radiation 1.0 4320 > th dose independent sin 15 NA
409 346.34 precipitation 0.1 43200 < th dose independent rect. 12 1
410 346.34 precipitation 0.1 43200 < th dose dependent rect. 12 1
416 346.40 radiation 10.0 14400 > th dose independent rect. 10 1
417 346.40 wind 9.0 720 < th dose independent rect. 21 22
419 346.44 radiation 10.0 14400 > th dose independent rect. 5 7
431 346.44 radiation 1.0 4320 < th dose dependent sin 14 NA
487 346.91 precipitation 0.1 43200 < th dose independent rect. 7 9
488 346.91 precipitation 0.1 43200 < th dose dependent rect. 7 9
491 346.95 precipitation 0.1 43200 > th dose independent rect. 7 9
492 346.95 precipitation 0.1 43200 < th dose independent rect. 7 20
493 346.95 temperature 30.0 4320 < th dose dependent rect. 23 1
494 346.95 precipitation 0.1 43200 < th dose dependent rect. 7 20
497 347.03 temperature 10.0 4320 > th dose dependent rect. 23 1
501 347.04 precipitation 0.1 43200 > th dose independent rect. 7 20
513 347.15 radiation 1.0 14400 > th dose dependent rect. 12 1
517 347.18 precipitation 0.1 43200 < th dose independent rect. 10 17
518 347.18 precipitation 0.1 43200 < th dose dependent rect. 10 17
520 347.21 radiation 10.0 14400 > th dose independent sin 8 NA
521 347.22 precipitation 0.1 43200 < th dose independent rect. 7 12
522 347.22 precipitation 0.1 43200 > th dose independent rect. 10 17
523 347.22 precipitation 0.1 43200 < th dose dependent rect. 7 12
527 347.28 precipitation 0.1 43200 > th dose independent rect. 7 12
546 347.39 radiation 10.0 14400 < th dose independent rect. 9 3
556 347.44 temperature 20.0 720 > th dose dependent rect. 22 19
592 347.58 wind 1.0 43200 < th dose independent rect. 23 9
598 347.61 radiation 40.0 14400 > th dose dependent rect. 12 1
619 347.68 radiation 1.0 4320 < th dose independent sin 14 NA
652 347.84 precipitation 0.1 43200 < th dose independent rect. 10 3
655 347.84 precipitation 0.1 43200 < th dose dependent rect. 10 3
663 347.89 precipitation 0.1 43200 > th dose dependent rect. 7 9
665 347.91 temperature 20.0 270 > th dose dependent rect. 15 10
668 347.94 precipitation 0.1 43200 > th dose independent rect. 10 3
670 347.94 precipitation 0.1 43200 > th dose dependent rect. 10 3
694 348.03 wind 1.0 43200 > th dose independent rect. 10 14
718 348.12 temperature 20.0 43200 > th dose independent rect. 3 1
726 348.13 temperature 20.0 10 > th dose dependent rect. 16 20
733 348.16 precipitation 0.1 43200 > th dose independent rect. 14 13
737 348.17 precipitation 0.1 43200 < th dose independent rect. 14 13
741 348.17 precipitation 0.1 43200 < th dose dependent rect. 14 13
762 348.24 temperature 20.0 43200 < th dose independent rect. 3 1
787 348.35 precipitation 0.1 43200 < th dose independent rect. 7 16
789 348.35 precipitation 0.1 43200 < th dose dependent rect. 7 16
799 348.40 wind 1.0 43200 < th dose independent rect. 10 14
803 348.41 precipitation 0.1 43200 > th dose independent rect. 7 16
851 348.57 wind 7.0 720 < th dose independent rect. 21 14
858 348.60 radiation 10.0 14400 > th dose dependent rect. 5 2
884 348.67 temperature 15.0 43200 > th dose dependent rect. 21 1
901 348.72 radiation 20.0 14400 < th dose independent rect. 12 1
926 348.79 precipitation 0.1 43200 > th dose independent sin 22 NA
929 348.79 temperature 25.0 43200 < th dose dependent rect. 21 1
931 348.79 temperature 10.0 4320 > th dose dependent rect. 20 7
932 348.79 temperature 30.0 4320 < th dose dependent rect. 20 7
933 348.80 precipitation 0.1 43200 < th dose independent sin 22 NA
935 348.80 precipitation 0.1 43200 < th dose dependent sin 22 NA
945 348.85 temperature 15.0 14400 > th dose independent rect. 20 1
953 348.87 temperature 10.0 4320 > th dose dependent rect. 21 5
967 348.90 temperature 25.0 720 > th dose dependent rect. 23 11
978 348.96 precipitation 0.1 43200 < th dose independent rect. 10 1
980 348.96 precipitation 0.1 43200 < th dose dependent rect. 10 1