BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0153500 Os03g0153500|Os03g0153500
(401 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38540.1 | chr4:18023187-18024827 FORWARD LENGTH=408 311 5e-85
AT5G05320.1 | chr5:1575093-1576679 REVERSE LENGTH=407 304 6e-83
AT2G35660.1 | chr2:14988499-14990320 FORWARD LENGTH=440 199 2e-51
AT2G29720.1 | chr2:12700592-12702289 REVERSE LENGTH=428 192 3e-49
AT4G15760.1 | chr4:8972785-8974548 REVERSE LENGTH=423 183 1e-46
AT4G15765.1 | chr4:8975783-8977211 REVERSE LENGTH=272 73 3e-13
AT5G67030.1 | chr5:26753745-26757090 REVERSE LENGTH=668 69 4e-12
>AT4G38540.1 | chr4:18023187-18024827 FORWARD LENGTH=408
Length = 407
Score = 311 bits (796), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/384 (45%), Positives = 235/384 (61%), Gaps = 17/384 (4%)
Query: 28 GVKCTVLESSPELRASGFAIATWRNALQALDALGVGDKIRKCHLHLQELHVFSSFTGEMA 87
G++ VLESS LRA+GFA TW NA +A++ALGV IR H L+ V G ++
Sbjct: 29 GIRSMVLESSETLRATGFAFTTWFNAWKAMEALGVSQHIRSLHDRLEGWVV-----GTIS 83
Query: 88 HATSLNEQ--GKRGPNEMLCVRRDWLLRALEEELPEGTIRYSSKIVEIEEDGDAKILHLA 145
T E + E CV+R LL AL ELPE TIR+SSK+V IE G K +HL+
Sbjct: 84 AGTPPTEMLFPESEEYESRCVQRKLLLEALAGELPEETIRFSSKVVHIELSGCYKKVHLS 143
Query: 146 DGAILRAKVVIGCDGVNSVVAKWLGLAKPSYSGRLATRGLACYPGGHGFDPKFKMFFGHG 205
DG IL+ KV++GCDGV SVV KWLG P+ + RLA RGL +P GHGF +F F+G G
Sbjct: 144 DGTILKTKVLVGCDGVYSVVGKWLGFKNPATTARLAIRGLTHFPEGHGFGKRFFQFYGDG 203
Query: 206 FRLGVIPCNDTDVYWFFTWSPSEHDDDALAKN-KKFVLTKLNSAEIPAEVLEIIERSEAK 264
R G IPC+ VYWF T + ++ D++ ++ K+FVL K+ ++P + ++E ++
Sbjct: 204 VRSGFIPCDHNTVYWFLTHTSTDIDEETNSEILKEFVLNKIK--DLPENIKNVVETTDLD 261
Query: 265 DVLTXXXXXXXXXXXXXXXISKGNVCVAGDALHPMTPDLGQGGCAALEDGVVLARCLGDA 324
++ I+K NVCVAGDALHPMTPD+GQGGC+A+EDGV+LARCLG+A
Sbjct: 262 SMVMSQLKYRPPWELLWSNITKDNVCVAGDALHPMTPDIGQGGCSAMEDGVILARCLGEA 321
Query: 325 ILXXXXXXAES-------ERIEAGLREYARIRRWRSAELIGTAYAVGFMQESSNAVISFL 377
I +RIE GL++YA R+WRS +LI TAY VGF+Q+S ++
Sbjct: 322 IKAKSLKGETEENEEEGYKRIEEGLKKYAGERKWRSIDLITTAYTVGFIQQSRGKWMNMF 381
Query: 378 RDNWLAGALVRKLLKMADYDCGKL 401
RD +L+ L R LLK + +DCG L
Sbjct: 382 RDRFLSSYLSRMLLKKSHFDCGSL 405
>AT5G05320.1 | chr5:1575093-1576679 REVERSE LENGTH=407
Length = 406
Score = 304 bits (778), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 232/381 (60%), Gaps = 13/381 (3%)
Query: 28 GVKCTVLESSPELRASGFAIATWRNALQALDALGVGDKIRKCHLHLQELHVFSSFTGEMA 87
G++ VLESS +LRA+GFA++ + NA +A++ALG+ IR Q V G+
Sbjct: 29 GIRSIVLESSEQLRATGFALSLYFNAWKAMEALGISQHIRSLGDRFQGWVVRPISAGDPP 88
Query: 88 HATSLNEQGKRGPNEMLCVRRDWLLRALEEELPEGTIRYSSKIVEIEEDGDAKILHLADG 147
E + E+ CV+R LL AL ELP+GTIR+SSK+V IE G K++HL+DG
Sbjct: 89 KEMLFPESEEY---EVRCVQRKLLLDALAGELPQGTIRFSSKLVHIELSGHYKMVHLSDG 145
Query: 148 AILRAKVVIGCDGVNSVVAKWLGLAKPSYSGRLATRGLACYPGGHGFDPKFKMFFGHGFR 207
IL+ KV++GCDGV SVV KWLG P + R+A RG+A + GH +F F+G+G R
Sbjct: 146 TILKTKVLVGCDGVKSVVGKWLGFKNPVKTSRVAIRGIAHFQTGHELGRRFFQFYGNGVR 205
Query: 208 LGVIPCNDTDVYWFFTWSPSEHDDDALAKNKKFVLTKLNSAEIPAEVLEIIERSEAKDVL 267
G I C+ VYWF T + ++ D K K+FVLTK+ ++P + I+E ++ ++
Sbjct: 206 SGFISCDQNTVYWFLTHTSTDLDKKNHQKIKQFVLTKIK--DLPDNIKSILETTDLDSLV 263
Query: 268 TXXXXXXXXXXXXXXXISKGNVCVAGDALHPMTPDLGQGGCAALEDGVVLARCLGDAILX 327
I+K NVCVAGDALHPMTPD+GQGGC+A+EDGV+LARCLG+A +
Sbjct: 264 MNPLMYRPPWELLWANIAKDNVCVAGDALHPMTPDIGQGGCSAMEDGVILARCLGEA-MK 322
Query: 328 XXXXXAESE-------RIEAGLREYARIRRWRSAELIGTAYAVGFMQESSNAVISFLRDN 380
E+E RIE GL++YA R+WRS +LI T+Y VGF+Q+S ++ RD
Sbjct: 323 AKNMKGETEDENESYRRIEDGLKKYAGSRKWRSIDLITTSYTVGFIQQSRGKWMTLFRDK 382
Query: 381 WLAGALVRKLLKMADYDCGKL 401
+++ L +K + ++CG+L
Sbjct: 383 FMSSFLSWLRVKKSHFNCGRL 403
>AT2G35660.1 | chr2:14988499-14990320 FORWARD LENGTH=440
Length = 439
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 191/390 (48%), Gaps = 22/390 (5%)
Query: 20 TGGKLRGKGVKCTVLESSPELRASGFAIATWRNALQALDALGVGDKIRKCHLHLQELHVF 79
T L G++ VLE + LR G ++ ++N + LDA+ VG ++R L ++ + V
Sbjct: 59 TAVSLHRLGIRSVVLEQAESLRTGGTSLTLFKNGWRVLDAISVGPQLRTQFLEIEGMVVK 118
Query: 80 SSFTGEMAHATSLNEQGKRGPNEMLCVRRDWLLRALEEELPEGTIRYSSKIVEIEEDGDA 139
E+ S + E+ V R LL L +LP TIR+SSK+ I+ + +
Sbjct: 119 KEDGREL---RSFKFKDDDQSQEVRAVERRVLLETLASQLPPQTIRFSSKLESIQSNANG 175
Query: 140 -KILHLADGAILRAKVVIGCDGVNSVVAKWLGLAKPSYSGRLATRGLACYPGGHGFDPKF 198
+L L DG L A++VIGCDG+ S VA W+G ++P Y G A RGL YP G F K
Sbjct: 176 DTLLQLGDGTRLLAQIVIGCDGIRSKVATWMGFSEPKYVGHCAYRGLGFYPNGQPFQKKV 235
Query: 199 KMFFGHGFRLGVIPCNDTDVYWFFTWS-----PSEHDDDALAKNKKFVLTKLNSAEIPAE 253
+G G R G +P + T VYWF ++ P D L K K +++ P +
Sbjct: 236 NYIYGKGIRAGYVPVSTTKVYWFICFNSPSLGPKITDPAILKKQAKELVSTW-----PED 290
Query: 254 VLEIIERSEAKDVLTXXXXXXXXXXXXXXXISKGNVCVAGDALHPMTPDLGQGGCAALED 313
+ +I+ + + + SKG V + GDA HPMTP+LGQG C ALED
Sbjct: 291 LQNLIDLTPDETISRTPLVDRWLWPGIAPPASKGRVVLVGDAWHPMTPNLGQGACCALED 350
Query: 314 GVVLARCLGDAILXXXXXXAESERIEAGLREYARIRRWRSAELIGTAYAVGFMQESSNAV 373
VVLA L +AI +E IE + Y R R+ L A VG + + N +
Sbjct: 351 SVVLANKLANAI------NGGTESIEVAMESYGSERWSRAFPLTVRANLVGALLQWENPL 404
Query: 374 ISFLRDNWLAGALVR--KLLKMADYDCGKL 401
+ +R+N + L+R +L+ +++C L
Sbjct: 405 VCSIRNNIVIPKLLRLGPMLEHTNFECEPL 434
>AT2G29720.1 | chr2:12700592-12702289 REVERSE LENGTH=428
Length = 427
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 176/360 (48%), Gaps = 22/360 (6%)
Query: 28 GVKCTVLESSPELRASGFAIATWRNALQALDALGVGDKIRKCHLHLQELHVFSSFTGEMA 87
G++ VLE + LR G ++ +N + LDA+ +G ++RK L +Q + V G
Sbjct: 65 GIRSVVLEQAESLRTGGASLTLSKNGWRVLDAISIGPQLRKQFLEMQGV-VLKKEDGREL 123
Query: 88 HATSLNEQGKRGPNEMLCVRRDWLLRALEEELPEGTIRYSSKIVEIEEDGDA-KILHLAD 146
+ + + E+ V R LL L +LP TIR+SSK+ I+ + + +L L D
Sbjct: 124 RSFKFKDNDQS--QEVRGVERRVLLETLASQLPPQTIRFSSKLESIQSNANGDTLLQLKD 181
Query: 147 GAILRAKVVIGCDGVNSVVAKWLGLAKPSYSGRLATRGLACYPGGHGFDPKFKMFFGHGF 206
G A +VIGCDG+ S VA W+G ++P Y G A RGL +P G F K FG G
Sbjct: 182 GTRFLANIVIGCDGIRSKVATWMGFSEPKYVGYCAFRGLGFFPNGQPFQQKVNYIFGRGL 241
Query: 207 RLGVIPCNDTDVYWFFTWS-----PSEHDDDALAKNKKFVLTKLNSAEIPAEVLEIIERS 261
R G +P + T VYWF T++ P D L K K +++ P ++ +I+ +
Sbjct: 242 RAGYVPVSATKVYWFITFNSPSLGPQMMDPAILRKEAKELVSTW-----PEDLQNLIDLT 296
Query: 262 EAKDVLTXXXXXXXXXXXXXXXISKGNVCVAGDALHPMTPDLGQGGCAALEDGVVLARCL 321
+ + SKG V + GDA HPMTP+LGQG C ALED V+LA L
Sbjct: 297 PDEAISRTPLADRWLWPGIAPSASKGRVVLVGDAWHPMTPNLGQGACCALEDSVLLANKL 356
Query: 322 GDAILXXXXXXAESERIEAGLREYARIRRWRSA-ELIGTAYAVGFMQESSNAVISFLRDN 380
AI +E +E + Y R RW L A VG + +S N ++ +RDN
Sbjct: 357 ASAI------NGGTESVEGAMESY-RSERWSQVFRLTVLANLVGKLLQSDNPLVCSVRDN 409
>AT4G15760.1 | chr4:8972785-8974548 REVERSE LENGTH=423
Length = 422
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 193/398 (48%), Gaps = 34/398 (8%)
Query: 20 TGGKLRGKGVKCTVLESSPELRASGFAIATWRNALQALDALGVGDKIRKCHLHLQELHVF 79
T L KG+K VLE + ++R+ G I T N +ALD LGVGD++R
Sbjct: 43 TSIALHRKGIKSVVLERAEKVRSEGAGIGTLSNGWRALDQLGVGDRLR------------ 90
Query: 80 SSFTGEMAHA--TSLNEQGKRGP------NEMLCVRRDWLLRALEEELPEGTIRYSSKIV 131
+ H T L E GK+ +E C++R+ L+ AL + LP+GTIR+ S IV
Sbjct: 91 --LNSSLIHKARTMLIENGKKREFVSNIVDEARCIKRNDLVEALSDALPKGTIRFGSHIV 148
Query: 132 EIEEDGDA--KILHLADGAILRAKVVIGCDGVNSVVAKWLGL-AKPSYSGRLATRGLACY 188
IE+D ++HLA+G ++AKV+IGCDG NS+V+ +L L K +++ R A RG Y
Sbjct: 149 SIEQDKTTLFPVVHLANGNSIKAKVLIGCDGANSIVSDYLQLNPKKAFACR-AVRGFTKY 207
Query: 189 PGGHGFDPKFKMFFGHGFRLGVIPCNDTDVYWFFTWSPSEHDDDALAKNKKFV--LTKLN 246
P GHGF + +G +P D V+WF D++ K+++ + L +
Sbjct: 208 PNGHGFPQEVLRIKQGNVLIGRLPLTDNQVFWFLVHM---QDNNHNGKDQESIANLCRKW 264
Query: 247 SAEIPAEVLEIIERSEAKDVLTXXXXXXXXXXXXXXXISKGNVCVAGDALHPMTPDLGQG 306
+ ++ + E+++ + + +G V VAGDA+H M P L QG
Sbjct: 265 ADDLSEDWKEMVKICNVESLTLTHLRYRAPSEIMLGKFRRGTVTVAGDAMHVMGPFLAQG 324
Query: 307 GCAALEDGVVLARCLGDAI---LXXXXXXAESERIEAGLREYARIRRWRSAELIGTAYAV 363
G AALED VVLARCL + + IE + EY RR R L Y
Sbjct: 325 GSAALEDAVVLARCLARKVGPDHGDLLKDCSMKNIEEAIDEYVDERRMRLLGLSVQTYLT 384
Query: 364 GFMQESSNAVISFLRDNWLAGALVRKLLKMADYDCGKL 401
G ++S+ V+ + L R ++ YDCG+L
Sbjct: 385 GRSLQTSSKVLRLMFIALLLLLFGRDQIRHTRYDCGRL 422
>AT4G15765.1 | chr4:8975783-8977211 REVERSE LENGTH=272
Length = 271
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 84/213 (39%), Gaps = 15/213 (7%)
Query: 102 EMLCVRRDWLLRALEEELPEGTIRYSSKI--VEIEEDGDAKILHLADGAILRAKVVIGCD 159
E+ V R+ L+RAL LP GT+R I V+++E I+H V+IGCD
Sbjct: 69 EVRGVLRNDLVRALAHALPLGTLRLGCHILSVKLDETKSFPIVH----------VLIGCD 118
Query: 160 GVNSVVAKWLGLAKPSYSGRLATRGLACYPGGHGFDPKFKMFFGHGFRLGVIPCNDTDVY 219
G NSVV+++LGL G A RG YP HGF +F G +P V+
Sbjct: 119 GSNSVVSRFLGLNPTKDLGSRAIRGFTNYPDDHGFRQEFIRIKMDNVVSGRLPITHKLVF 178
Query: 220 WFFTWSPSEHDDDALAKNKKFVLTKLNSA-EIPAEVLEIIERSEAKDVLTXXXXXXXXXX 278
WF D + L + L S E E E+++ + +
Sbjct: 179 WFVVLRNCPQDSNFLKNQEDIARLALASVREFSEEWKEMVKNCDMDSLYINRLRYRAPWD 238
Query: 279 XXXXXISKGNVCVAGDALHPMTPDLGQG--GCA 309
+G V V P P L GCA
Sbjct: 239 VLSGKFRRGTVTVGRRQYAPNGPILRTRMFGCA 271
>AT5G67030.1 | chr5:26753745-26757090 REVERSE LENGTH=668
Length = 667
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 108/271 (39%), Gaps = 20/271 (7%)
Query: 91 SLNEQGKRGPNEMLCVRRDWLLRALEEELPEGTIRYSSKIVEIEEDGDAKILHLADGAIL 150
+ RG + R L + L + E IR S +V+ E+ GD + L +G
Sbjct: 175 TFTPAASRGLPVTRVISRMTLQQILARAVGEDVIRNESNVVDFEDSGDKVTVVLENGQRY 234
Query: 151 RAKVVIGCDGVNSVVAKWL-GLAKPSYSGRLATRGLACYPGGHGFDPK------FKMFFG 203
+++G DG+ S V L G ++ +YSG CY G F P +++F G
Sbjct: 235 EGDLLVGADGIWSKVRNNLFGRSEATYSG------YTCYTGIADFIPADIESVGYRVFLG 288
Query: 204 HGFRLGVIPCNDTDVYWFFTWSPSEHDDDALAKNKKFVLTKLNSAEIPAEVLEIIERSEA 263
H + W+ DA KK + + VL+++ +E
Sbjct: 289 HKQYFVSSDVGGGKMQWYAFHEEPAGGADAPNGMKKRLFEIFDG--WCDNVLDLLHATEE 346
Query: 264 KDVLTXXXXXXXXXXXXXXXISKGNVCVAGDALHPMTPDLGQGGCAALEDGVVLARCLGD 323
+ +L KG V + GD++H M P++GQGGC A+ED LA L +
Sbjct: 347 EAILRRDIYDRSPGFTW----GKGRVTLLGDSIHAMQPNMGQGGCMAIEDSFQLALELDE 402
Query: 324 AILXXXXXXAESERIEAGLREYARIRRWRSA 354
A + + + L+ Y RR R A
Sbjct: 403 AWKQSVETTTPVD-VVSSLKRYEESRRLRVA 432
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,384,985
Number of extensions: 343600
Number of successful extensions: 647
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 630
Number of HSP's successfully gapped: 7
Length of query: 401
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 300
Effective length of database: 8,337,553
Effective search space: 2501265900
Effective search space used: 2501265900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)