Os03g0148400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF740 family protein.
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Os03g0148400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF740 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.19 | 0.466 | 6.94 | -0.0174 | 0.897 | 0.412 | -0.916 | 3.21 | -0.0308 | 7.05 | 27.84 | 3312 | -- | -- |
| 98.92 | 0.463 | 7.01 | -0.639 | 0.946 | 0.742 | -0.925 | -- | -0.102 | 6.97 | 27.62 | 4694 | -- | -- |
| 100.34 | 0.467 | 6.93 | 0.0261 | 0.896 | 0.394 | -- | 3.47 | -0.0218 | 7.13 | 27.63 | 3337 | -- | -- |
| 100.94 | 0.468 | 7.01 | -0.657 | 0.935 | 0.732 | -- | -- | -0.107 | 7.03 | 27.7 | 4737 | -- | -- |
| 140.32 | 0.552 | 6.9 | 0.496 | -- | 0.128 | -- | 4.66 | 0.0636 | -- | 27.12 | 2831 | -- | -- |
| 118.41 | 0.51 | 7.02 | -0.428 | 0.902 | -- | -0.945 | -- | -0.159 | 6.85 | -- | -- | -- | -- |
| 120.69 | 0.514 | 7.02 | -0.444 | 0.899 | -- | -- | -- | -0.156 | 6.89 | -- | -- | -- | -- |
| 140.4 | 0.552 | 7.02 | -0.632 | -- | 0.662 | -- | -- | -0.0652 | -- | 29.2 | 5730 | -- | -- |
| 111.38 | 0.492 | 6.99 | -- | 0.922 | 0.595 | -- | -- | -0.0174 | 7.07 | 28.69 | 4746 | -- | -- |
| 163.02 | 0.597 | 7.04 | -0.425 | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
| 125.9 | 0.525 | 7.01 | -- | 0.893 | -- | -- | -- | -0.107 | 6.92 | -- | -- | -- | -- |
| 150.32 | 0.571 | 7.01 | -- | -- | 0.555 | -- | -- | 0.00177 | -- | 29.6 | 5738 | -- | -- |
| 167.79 | 0.605 | 7.03 | -- | -- | -- | -- | -- | -0.0922 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.00 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 2 | 98.10 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 3 | 98.15 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 4 | 98.23 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 5 | 98.30 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 7 | 98.32 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 10 | 98.33 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 23 | 98.56 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 37 | 98.68 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 50 | 98.76 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 59 | 98.79 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 18 |
| 60 | 98.80 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 71 | 98.83 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 73 | 98.84 | temperature | 25 | 4320 | > th | dose dependent | sin | 7 | NA |
| 89 | 98.90 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 107 | 98.91 | temperature | 30 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 108 | 98.91 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 110 | 98.91 | temperature | 30 | 4320 | < th | dose independent | rect. | 23 | 15 |
| 113 | 98.92 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 115 | 98.92 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 12 |
| 134 | 98.93 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 146 | 98.95 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 147 | 98.95 | temperature | 30 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 152 | 98.96 | temperature | 30 | 4320 | > th | dose independent | rect. | 18 | 21 |
| 153 | 98.96 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 174 | 98.98 | temperature | 30 | 4320 | < th | dose independent | sin | 5 | NA |
| 200 | 99.01 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 201 | 99.01 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 261 | 99.04 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 309 | 99.07 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 347 | 99.09 | temperature | 30 | 4320 | > th | dose independent | sin | 5 | NA |
| 432 | 99.14 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 460 | 99.15 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 17 |
| 510 | 99.18 | temperature | 25 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 544 | 99.21 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 585 | 99.22 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 647 | 99.25 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 672 | 99.28 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 676 | 99.28 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 6 |
| 748 | 99.31 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 16 |
| 789 | 99.32 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 922 | 99.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 972 | 99.38 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |