Os03g0147400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Citrate transporter family protein.
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Os03g0147400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Citrate transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.4 | 0.337 | 13 | 0.474 | 0.677 | -1.06 | 1.08 | 0.888 | 0.224 | 9.94 | 25.5 | 29 | -- | -- |
| 51.42 | 0.337 | 13 | 0.375 | 0.696 | -0.983 | 1.14 | -- | 0.199 | 9.91 | 25.5 | 28 | -- | -- |
| 55.48 | 0.35 | 13 | 0.589 | 0.704 | -1.13 | -- | 1.59 | 0.245 | 10.1 | 25.5 | 28 | -- | -- |
| 56.46 | 0.352 | 13 | 0.422 | 0.69 | -0.993 | -- | -- | 0.202 | 10 | 25.5 | 28 | -- | -- |
| 72.62 | 0.397 | 13 | 0.379 | -- | -0.864 | -- | -0.497 | 0.216 | -- | 24.1 | 386 | -- | -- |
| 65.79 | 0.38 | 13 | 0.24 | 0.675 | -- | 1.37 | -- | 0.146 | 8.03 | -- | -- | -- | -- |
| 71.4 | 0.396 | 13 | 0.277 | 0.675 | -- | -- | -- | 0.144 | 7.95 | -- | -- | -- | -- |
| 72.65 | 0.397 | 13 | 0.442 | -- | -0.902 | -- | -- | 0.251 | -- | 23.99 | 385 | -- | -- |
| 60.99 | 0.366 | 13 | -- | 0.678 | -0.89 | -- | -- | 0.151 | 9.78 | 25.5 | 28 | -- | -- |
| 96.23 | 0.458 | 13.1 | 0.284 | -- | -- | -- | -- | 0.153 | -- | -- | -- | -- | -- |
| 73.42 | 0.401 | 13 | -- | 0.677 | -- | -- | -- | 0.114 | 7.92 | -- | -- | -- | -- |
| 77.63 | 0.41 | 13 | -- | -- | -0.835 | -- | -- | 0.191 | -- | 24.18 | 364 | -- | -- |
| 98.36 | 0.463 | 13.1 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.89 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 17 | 48.12 | temperature | 15 | 270 | > th | dose dependent | sin | 3 | NA |
| 24 | 48.31 | temperature | 25 | 90 | > th | dose dependent | sin | 1 | NA |
| 25 | 48.34 | temperature | 25 | 90 | > th | dose dependent | rect. | 22 | 19 |
| 49 | 48.86 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 112 | 49.63 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 10 |
| 119 | 49.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 7 |
| 121 | 49.69 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 12 |
| 183 | 50.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 220 | 50.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 262 | 50.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 311 | 50.69 | temperature | 25 | 270 | > th | dose independent | sin | 2 | NA |
| 316 | 50.71 | temperature | 25 | 270 | < th | dose independent | sin | 1 | NA |
| 345 | 50.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 398 | 51.00 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 16 |
| 409 | 51.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 463 | 51.17 | temperature | 25 | 30 | > th | dose dependent | rect. | 9 | 14 |
| 506 | 51.30 | temperature | 25 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 507 | 51.30 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 544 | 51.36 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 550 | 51.37 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 15 |
| 559 | 51.39 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 12 |
| 583 | 51.44 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 707 | 51.63 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 994 | 52.14 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |