Os03g0137300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0137300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.14 | 0.316 | 12.5 | -0.613 | 1.81 | 0.831 | 0.467 | -2.91 | -0.542 | 15.1 | 25.4 | 10 | -- | -- |
| 47.73 | 0.324 | 12.4 | -0.295 | 1.83 | 0.615 | 0.0593 | -- | -0.459 | 15.1 | 25.4 | 10 | -- | -- |
| 45.58 | 0.317 | 12.5 | -0.542 | 1.8 | 0.823 | -- | -2.34 | -0.525 | 15.1 | 25.4 | 10 | -- | -- |
| 47.74 | 0.324 | 12.4 | -0.294 | 1.83 | 0.62 | -- | -- | -0.459 | 15.1 | 25.4 | 10 | -- | -- |
| 159.84 | 0.589 | 12.5 | -0.956 | -- | 2.6 | -- | -2.83 | -0.809 | -- | 24.2 | 24 | -- | -- |
| 53.23 | 0.342 | 12.4 | -0.209 | 2.06 | -- | 0.249 | -- | -0.421 | 15.1 | -- | -- | -- | -- |
| 53.44 | 0.342 | 12.4 | -0.204 | 2.06 | -- | -- | -- | -0.419 | 15 | -- | -- | -- | -- |
| 167.21 | 0.602 | 12.5 | -0.574 | -- | 2.26 | -- | -- | -0.689 | -- | 24.2 | 13 | -- | -- |
| 49.94 | 0.331 | 12.4 | -- | 1.87 | 0.546 | -- | -- | -0.423 | 15.1 | 25.4 | 10 | -- | -- |
| 296.66 | 0.805 | 12.4 | -0.291 | -- | -- | -- | -- | -0.473 | -- | -- | -- | -- | -- |
| 54.53 | 0.345 | 12.4 | -- | 2.07 | -- | -- | -- | -0.397 | 15 | -- | -- | -- | -- |
| 177.13 | 0.62 | 12.5 | -- | -- | 2.19 | -- | -- | -0.633 | -- | 24.3 | 13 | -- | -- |
| 298.9 | 0.807 | 12.4 | -- | -- | -- | -- | -- | -0.441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.71 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 19 |
| 10 | 39.63 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 12 | 40.01 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 4 |
| 14 | 40.06 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 21 | 40.30 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 33 | 40.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 37 | 40.67 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 41 | 40.71 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 45 | 40.77 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 49 | 40.87 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 52 | 40.93 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 11 |
| 54 | 40.94 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 5 |
| 59 | 40.97 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 60 | 40.97 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 66 | 41.06 | humidity | 80.0 | 10 | > th | dose independent | rect. | 4 | 19 |
| 68 | 41.07 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 72 | 41.12 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 76 | 41.13 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 78 | 41.16 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 80 | 41.16 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 81 | 41.16 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 86 | 41.18 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 14 |
| 92 | 41.22 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 97 | 41.25 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 98 | 41.27 | wind | 7.0 | 10 | < th | dose independent | rect. | 7 | 21 |
| 102 | 41.29 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 110 | 41.31 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 115 | 41.33 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 126 | 41.38 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 17 |
| 131 | 41.41 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 19 |
| 134 | 41.45 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 142 | 41.48 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 145 | 41.50 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 156 | 41.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 15 |
| 169 | 41.67 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 177 | 41.69 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 9 |
| 178 | 41.69 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 218 | 41.85 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 236 | 41.92 | humidity | 90.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 241 | 41.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 244 | 41.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 247 | 41.97 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 267 | 42.06 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 293 | 42.16 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 304 | 42.21 | humidity | 80.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 309 | 42.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 3 |
| 312 | 42.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 329 | 42.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 331 | 42.26 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 332 | 42.26 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 335 | 42.26 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 336 | 42.26 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 337 | 42.26 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 340 | 42.26 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 343 | 42.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 344 | 42.26 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 345 | 42.26 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 360 | 42.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 363 | 42.31 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 11 |
| 366 | 42.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 381 | 42.36 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 382 | 42.36 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 386 | 42.37 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 388 | 42.37 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 413 | 42.42 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 9 |
| 415 | 42.42 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 13 |
| 438 | 42.46 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 442 | 42.47 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 445 | 42.47 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 447 | 42.47 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 448 | 42.47 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 449 | 42.47 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 452 | 42.47 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 533 | 42.60 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 555 | 42.65 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 558 | 42.65 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 568 | 42.67 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 599 | 42.73 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 604 | 42.74 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 19 |
| 616 | 42.77 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 644 | 42.82 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 667 | 42.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 672 | 42.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 694 | 42.91 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 699 | 42.91 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 709 | 42.92 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 746 | 43.00 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 776 | 43.07 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 823 | 43.14 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 825 | 43.14 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 828 | 43.15 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 867 | 43.19 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 952 | 43.32 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 19 |
| 954 | 43.32 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 955 | 43.33 | wind | 9.0 | 10 | < th | dose independent | rect. | 23 | 5 |
| 956 | 43.33 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 5 |
| 957 | 43.33 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 5 |
| 958 | 43.33 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 5 |
| 961 | 43.33 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 5 |
| 962 | 43.33 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 5 |
| 969 | 43.33 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 19 |
| 972 | 43.33 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 19 |
| 975 | 43.33 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 5 |
| 994 | 43.36 | temperature | 25.0 | 90 | > th | dose independent | sin | 2 | NA |