Os03g0136800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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Os03g0136800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.49 | 0.173 | 12.3 | -0.264 | 0.588 | 0.261 | -0.219 | -1.01 | -0.0294 | 7.28 | 26.41 | 4680 | -- | -- |
| 14.55 | 0.178 | 12.3 | -0.0565 | 0.573 | 0.178 | -0.162 | -- | -0.00219 | 7.23 | 26.1 | 19898 | -- | -- |
| 13.62 | 0.172 | 12.3 | -0.265 | 0.587 | 0.261 | -- | -0.999 | -0.0282 | 7.28 | 26.43 | 4676 | -- | -- |
| 14.64 | 0.178 | 12.3 | -0.0387 | 0.581 | 0.165 | -- | -- | -0.0015 | 7.3 | 26.1 | 19897 | -- | -- |
| 31.51 | 0.261 | 12.3 | -0.237 | -- | 0.232 | -- | -0.882 | -0.00924 | -- | 26.21 | 4368 | -- | -- |
| 15.13 | 0.182 | 12.3 | 0.0778 | 0.577 | -- | -0.216 | -- | 0.0706 | 7.28 | -- | -- | -- | -- |
| 15.25 | 0.183 | 12.3 | 0.0732 | 0.577 | -- | -- | -- | 0.0711 | 7.28 | -- | -- | -- | -- |
| 32.04 | 0.264 | 12.3 | 0.00714 | -- | 0.182 | -- | -- | 0.0383 | -- | 26.5 | 5695 | -- | -- |
| 14.67 | 0.178 | 12.3 | -- | 0.578 | 0.148 | -- | -- | 0.00862 | 7.3 | 26.1 | 19897 | -- | -- |
| 32.91 | 0.268 | 12.3 | 0.0832 | -- | -- | -- | -- | 0.0808 | -- | -- | -- | -- | -- |
| 15.39 | 0.184 | 12.3 | -- | 0.578 | -- | -- | -- | 0.0629 | 7.27 | -- | -- | -- | -- |
| 32.03 | 0.264 | 12.3 | -- | -- | 0.176 | -- | -- | 0.0435 | -- | 26.4 | 5679 | -- | -- |
| 33.09 | 0.268 | 12.3 | -- | -- | -- | -- | -- | 0.0716 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.16 | radiation | 30 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 2 | 13.17 | radiation | 20 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 3 | 13.19 | radiation | 40 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 12 | 13.20 | radiation | 30 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 37 | 13.22 | radiation | 30 | 14400 | < th | dose independent | sin | 22 | NA |
| 74 | 13.23 | radiation | 30 | 14400 | < th | dose independent | sin | 19 | NA |
| 80 | 13.23 | radiation | 30 | 14400 | < th | dose independent | no | NA | NA |
| 160 | 13.23 | radiation | 20 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 246 | 13.23 | radiation | 30 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 257 | 13.24 | radiation | 30 | 14400 | < th | dose independent | sin | 17 | NA |
| 382 | 13.26 | radiation | 30 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 389 | 13.27 | radiation | 40 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 421 | 13.27 | radiation | 20 | 14400 | > th | dose dependent | rect. | 10 | 22 |
| 423 | 13.28 | radiation | 40 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 480 | 13.28 | radiation | 20 | 14400 | > th | dose dependent | sin | 17 | NA |
| 564 | 13.29 | radiation | 30 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 569 | 13.29 | radiation | 20 | 14400 | > th | dose dependent | sin | 15 | NA |
| 577 | 13.29 | radiation | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 578 | 13.29 | radiation | 20 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 585 | 13.29 | radiation | 20 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 596 | 13.29 | radiation | 20 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 782 | 13.29 | radiation | 20 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 802 | 13.30 | radiation | 20 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 830 | 13.30 | radiation | 20 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 930 | 13.31 | radiation | 30 | 14400 | > th | dose independent | sin | 18 | NA |
| 938 | 13.31 | radiation | 30 | 14400 | > th | dose independent | no | NA | NA |