Os03g0135600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0135600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ankyrin repeat containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.63 | 0.314 | 10.7 | 0.863 | 0.0375 | -1.13 | -0.563 | 7.01 | -0.685 | 21.2 | 26.85 | 4294 | -- | -- |
| 53.73 | 0.341 | 10.8 | -0.653 | 0.0188 | -0.282 | -0.722 | -- | -0.826 | 20.3 | 29.95 | 8412 | -- | -- |
| 45.74 | 0.315 | 10.7 | 0.901 | 0.0408 | -1.15 | -- | 7.14 | -0.681 | 21.4 | 26.92 | 4340 | -- | -- |
| 50.79 | 0.332 | 10.8 | -0.385 | 0.00235 | -0.732 | -- | -- | -0.737 | 20.7 | 13.01 | 7413 | -- | -- |
| 45.8 | 0.315 | 10.7 | 0.88 | -- | -1.13 | -- | 7.04 | -0.687 | -- | 26.91 | 4389 | -- | -- |
| 57.32 | 0.355 | 10.9 | -0.768 | 0.0107 | -- | -0.581 | -- | -0.926 | 21 | -- | -- | -- | -- |
| 58.47 | 0.358 | 10.9 | -0.749 | 0.0215 | -- | -- | -- | -0.926 | 0.99 | -- | -- | -- | -- |
| 50.69 | 0.332 | 10.8 | -0.402 | -- | -0.676 | -- | -- | -0.744 | -- | 11.97 | 7246 | -- | -- |
| 54.02 | 0.342 | 10.8 | -- | 0.0449 | -0.769 | -- | -- | -0.671 | 6.92 | 15.2 | 7249 | -- | -- |
| 58.5 | 0.357 | 10.9 | -0.748 | -- | -- | -- | -- | -0.925 | -- | -- | -- | -- | -- |
| 73.24 | 0.4 | 10.8 | -- | 0.0124 | -- | -- | -- | -0.842 | 22.2 | -- | -- | -- | -- |
| 53.73 | 0.341 | 10.8 | -- | -- | -0.882 | -- | -- | -0.649 | -- | 14.03 | 7298 | -- | -- |
| 73.25 | 0.399 | 10.8 | -- | -- | -- | -- | -- | -0.842 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.58 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 10 | 44.74 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 14 | 44.76 | temperature | 25 | 4320 | > th | dose dependent | sin | 7 | NA |
| 30 | 44.83 | temperature | 30 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 35 | 44.84 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 19 |
| 68 | 45.05 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 70 | 45.08 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 81 | 45.15 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 117 | 45.28 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 15 |
| 121 | 45.28 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 18 |
| 156 | 45.31 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 161 | 45.31 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 21 |
| 170 | 45.32 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 252 | 45.41 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 263 | 45.45 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 264 | 45.45 | temperature | 30 | 4320 | < th | dose independent | rect. | 23 | 17 |
| 265 | 45.45 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 21 |
| 276 | 45.46 | temperature | 30 | 4320 | < th | dose independent | rect. | 1 | 15 |
| 293 | 45.49 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 321 | 45.58 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 20 |
| 324 | 45.59 | radiation | 20 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 348 | 45.64 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 440 | 45.70 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 445 | 45.71 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 454 | 45.74 | radiation | 20 | 43200 | < th | dose independent | sin | 8 | NA |
| 460 | 45.75 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 508 | 45.76 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 21 |
| 510 | 45.76 | radiation | 20 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 624 | 45.79 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 677 | 45.81 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 22 |
| 678 | 45.81 | radiation | 10 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 688 | 45.82 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 690 | 45.82 | radiation | 20 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 721 | 45.83 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 725 | 45.83 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 846 | 45.85 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 7 |
| 872 | 45.86 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 877 | 45.86 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 20 |
| 882 | 45.86 | radiation | 20 | 43200 | > th | dose dependent | sin | 8 | NA |
| 910 | 45.87 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 11 |
| 930 | 45.88 | radiation | 40 | 43200 | < th | dose independent | sin | 21 | NA |
| 939 | 45.88 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 974 | 45.88 | radiation | 40 | 43200 | > th | dose dependent | sin | 20 | NA |
| 976 | 45.88 | radiation | 20 | 43200 | > th | dose dependent | sin | 5 | NA |
| 998 | 45.89 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |