BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0135600 Os03g0135600|J065183G03
(408 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66055.1 | chr5:26417425-26419234 REVERSE LENGTH=436 266 1e-71
AT5G40160.1 | chr5:16062726-16064301 REVERSE LENGTH=316 125 3e-29
AT2G03430.1 | chr2:1036192-1037536 REVERSE LENGTH=241 62 5e-10
AT5G53470.1 | chr5:21710497-21712391 FORWARD LENGTH=339 60 3e-09
AT2G14255.1 | chr2:6036974-6040892 FORWARD LENGTH=537 59 4e-09
AT4G27780.1 | chr4:13847774-13849629 FORWARD LENGTH=355 57 1e-08
AT2G25600.1 | chr2:10894603-10898369 FORWARD LENGTH=889 55 6e-08
AT4G19150.1 | chr4:10471578-10472677 REVERSE LENGTH=244 53 3e-07
AT5G61230.1 | chr5:24628254-24628778 FORWARD LENGTH=175 53 4e-07
AT5G37500.1 | chr5:14889758-14894883 REVERSE LENGTH=821 52 5e-07
AT5G02620.1 | chr5:589666-591536 FORWARD LENGTH=525 52 7e-07
AT4G32500.1 | chr4:15681122-15685214 FORWARD LENGTH=881 50 2e-06
AT3G04710.1 | chr3:1278229-1280942 FORWARD LENGTH=457 50 2e-06
>AT5G66055.1 | chr5:26417425-26419234 REVERSE LENGTH=436
Length = 435
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 217/421 (51%), Gaps = 62/421 (14%)
Query: 34 PHSKSLL-PRRRPLVTSPS---------------SFAVAAVDEFDEDFAIGDCVVFEDDA 77
PH+ SLL PR P SPS S + + + +DF +GDC+V+ED
Sbjct: 7 PHTISLLLPRTSPSRLSPSLHSLAFPTRLRSLSYSSQTSILPDAGDDFIVGDCLVYEDGV 66
Query: 78 FEEPDVDLXXXXXXXXXXXXXXXXA----EAXXXXXXXLVPERWRDAAEEINLTKKEKRR 133
FE+P +D + LVPE WRD E+NLTKK+KR+
Sbjct: 67 FEDPYLDKEVTQVAKQERKKNRRGGAKRLDESEIEPENLVPEEWRDIQAEVNLTKKDKRK 126
Query: 134 IAHGLRFGSRLERR----APPAVAAPDEYRAYREGRLDAELGRVARDYAEPIERSXXXXX 189
IA + FG R+E++ P +++ Y+E +L A+L V D
Sbjct: 127 IAQEMEFGVRVEKKRQGLIPLRKVDLNDFLTYKEAKL-AQLRPVILDKPGNFSDDSGASS 185
Query: 190 XXXXXXXXXXXXXXXXNPRLGLGVRSLDDITELFNSTEYVPGEMEDGNNPKSRRKLFTDE 249
NPR + + D + + FNS +Y P + + + P RKL + E
Sbjct: 186 DGETAVSSPSERVAPKNPRWAVYGKGFDHVAKFFNSDKYDPSD-KKSDGP---RKLLSKE 241
Query: 250 EKVLLNKRVPDLEAATSSKWLPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAI 309
EK +LN R PDL ATS KWLPLHT+AA G+FYL+D+LLKHN+++NA D GL +H+AI
Sbjct: 242 EKFMLNSRNPDLAVATSKKWLPLHTLAACGEFYLVDSLLKHNLDINATDVGGLTVLHRAI 301
Query: 310 LSKKHAIINYLLRNSANPFI---------------------------------HDKYGWT 336
+ KK AI NYLLR SANPF+ D+ GWT
Sbjct: 302 IGKKQAITNYLLRESANPFVLDDEGATLMHYAVQTASAPTIKLLLLYNADINAQDRDGWT 361
Query: 337 PLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLELCLRLGHHARTYELIKLLKSFRLP 396
PLH+AVQ +R+DIVKLLLIKGAD +K +DG TPL LCL LG RTYE++KLLK F L
Sbjct: 362 PLHVAVQARRSDIVKLLLIKGADIEVKNKDGLTPLGLCLYLGREIRTYEVMKLLKEFPLS 421
Query: 397 K 397
+
Sbjct: 422 R 422
>AT5G40160.1 | chr5:16062726-16064301 REVERSE LENGTH=316
Length = 315
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 34/186 (18%)
Query: 240 KSRRKLFTDEEKVLLNKR-VPDLEAATSSKWLPLHTIAASGDFYLLDNLLKHNINVNALD 298
K +L EE+V+L + P+L+ ++ W PL T+A S L+DNL+++ ++++ +D
Sbjct: 123 KEVEQLLEPEERVILQQNEKPNLKMISTKSWKPLQTLALSMQIQLMDNLIENGLDIDDVD 182
Query: 299 KDGLPAIHKAILSKKHAIINYLLRNSANPFIHD-----------------------KY-- 333
KD A+HKAI+ KK A+I++LLR ANP + D KY
Sbjct: 183 KDNQTALHKAIIGKKEAVISHLLRKGANPHLQDRDGAAPIHYAVQVGALQTVKLLFKYNV 242
Query: 334 --------GWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLELCLRLGHHARTYE 385
GWTPLH+AVQ++ DI K+LL GAD+T +T+DG L+L L G ++Y+
Sbjct: 243 DVNVADNEGWTPLHIAVQSRNRDITKILLTNGADKTRRTKDGKLALDLALCFGRDFKSYD 302
Query: 386 LIKLLK 391
L+KLLK
Sbjct: 303 LVKLLK 308
>AT2G03430.1 | chr2:1036192-1037536 REVERSE LENGTH=241
Length = 240
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 247 TDEEKVLLNKRVPDLEAATSSKWLPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIH 306
+DE K ++N + + W PLH+ A+ G+ L++ LL +VNA + G A+H
Sbjct: 69 SDEAKTVINSKDDE-------GWAPLHSAASIGNAELVEVLLTRGADVNAKNNGGRTALH 121
Query: 307 KAILSKKHAIINYLLRNSANPFIHDKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQD 366
A + I LL + A I DK G TPLH A + ++ + L+ +GA+ +
Sbjct: 122 YAASKGRLEIAQLLLTHGAKINITDKVGCTPLHRAASVGKLEVCEFLIEEGAEIDATDKM 181
Query: 367 GFTPL 371
G T L
Sbjct: 182 GQTAL 186
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 251 KVLLNKRVPDLEAATSSKWLPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAIL 310
+VLL R D+ A + LH A+ G + LL H +N DK G +H+A
Sbjct: 100 EVLLT-RGADVNAKNNGGRTALHYAASKGRLEIAQLLLTHGAKINITDKVGCTPLHRAAS 158
Query: 311 SKKHAIINYLLRNSANPFIHDKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTP 370
K + +L+ A DK G T L +V + LL+ GAD ++ ++G+T
Sbjct: 159 VGKLEVCEFLIEEGAEIDATDKMGQTALMHSVICDDKQVAFLLIRHGADVDVEDKEGYTV 218
Query: 371 L 371
L
Sbjct: 219 L 219
>AT5G53470.1 | chr5:21710497-21712391 FORWARD LENGTH=339
Length = 338
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 214 RSLDDITELFNSTEYVPGEMEDGNNPKSRRKLFTDEEKVLLNKRVPDLEAATSSKWLPLH 273
+ +D +T+L+ P +E G+ ++R + + V + E+ K +H
Sbjct: 170 KYIDLVTQLY------PAWVEGGSKRRNRSGEAAGPMGPVFSSLVYEEESDNELKIDAIH 223
Query: 274 TIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSKKHAIINYLLRNSANPFIHDKY 333
A G+ L +++ I VNA D +G +H AI + L+ +A+ D
Sbjct: 224 AFAREGEVENLLKCIENGIPVNARDSEGRTPLHWAIDRGHLNVAEALVDKNADVNAKDNE 283
Query: 334 GWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLELC 374
G T LH AV +R + + L+ + AD T+K +DG +PL+LC
Sbjct: 284 GQTSLHYAVVCEREALAEFLVKQKADTTIKDEDGNSPLDLC 324
>AT2G14255.1 | chr2:6036974-6040892 FORWARD LENGTH=537
Length = 536
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 260 DLEAATSSKWLPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSKKHAIINY 319
D+ +A + + PLH A G + D LL+H + A+D +G A+H A + A +N+
Sbjct: 83 DVNSADNIQQTPLHWAAVKGSIDVADLLLQHGARIEAVDVNGFRAVHVASQYGQTAFVNH 142
Query: 320 LLRNSANPF-IHDKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPL------- 371
++ + A + D G +PLH A T+ V+LLL + A + + G TPL
Sbjct: 143 IIVDYAADYNALDIEGRSPLHWAAYNGFTETVRLLLFRDACQNRQDNTGCTPLHWAVIKE 202
Query: 372 --ELCLRLGHHARTYELI 387
E C L H ELI
Sbjct: 203 NVEACTLLVHAGTKEELI 220
>AT4G27780.1 | chr4:13847774-13849629 FORWARD LENGTH=355
Length = 354
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%)
Query: 253 LLNKRVPDLEAATSSKWLPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSK 312
+ + V D E+ K +H A G+ L ++ I VNA D +G +H AI
Sbjct: 218 VFSSLVYDEESENELKIDAIHGFAREGEVENLLKSIESGIPVNARDSEGRTPLHWAIDRG 277
Query: 313 KHAIINYLLRNSANPFIHDKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLE 372
I L+ +A+ D G TPLH AV R I + L+ + A+ K +DG +PL+
Sbjct: 278 HLNIAKVLVDKNADVNAKDNEGQTPLHYAVVCDREAIAEFLVKQNANTAAKDEDGNSPLD 337
Query: 373 LC 374
LC
Sbjct: 338 LC 339
>AT2G25600.1 | chr2:10894603-10898369 FORWARD LENGTH=889
Length = 888
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 270 LPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSKKHAIINYLLRNSANPFI 329
L L AA GD LL LL+ + N +DKDG A+H A H + LL + A+P I
Sbjct: 546 LSLCFAAARGDDLLLHQLLRRGSSPNEMDKDGRTALHIAASKGSHYCVVLLLEHGADPNI 605
Query: 330 HDKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLEL---CL 375
D G PL A+ + +I KLL GA +L + F+ L + CL
Sbjct: 606 RDSEGNVPLWEAIIGRHREIAKLLAENGAKLSLDSVSYFSGLAVEKNCL 654
>AT4G19150.1 | chr4:10471578-10472677 REVERSE LENGTH=244
Length = 243
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 272 LHTIAASGDFYLLDNLLKHN-INVNALDKDGLPAIHKAILSKKHAIINYLLRNSANPFIH 330
LH+ A SGD + +++ N + VN+ DK +H A + + +++YL +N A+
Sbjct: 20 LHSAARSGDLAAVQSIISSNPLAVNSRDKHSRTPLHLAAWAGHNEVVSYLCKNKADVGAA 79
Query: 331 DKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLELCLRLGHHARTYELIKLL 390
+H A Q ++V+ LL G T+ G TPL + H +E++K L
Sbjct: 80 AGDDMGAIHFASQKGHLEVVRTLLSAGGSVKSITRKGLTPLHYAAQGSH----FEIVKYL 135
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 271 PLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSKKHAIINYLLRNSANPFIH 330
PLH A +G ++ L K+ +V A D + AIH A ++ LL +
Sbjct: 53 PLHLAAWAGHNEVVSYLCKNKADVGAAAGDDMGAIHFASQKGHLEVVRTLLSAGGSVKSI 112
Query: 331 DKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLEL 373
+ G TPLH A Q +IVK L+ KGA T+ G +P ++
Sbjct: 113 TRKGLTPLHYAAQGSHFEIVKYLVKKGASVRATTKAGKSPADV 155
>AT5G61230.1 | chr5:24628254-24628778 FORWARD LENGTH=175
Length = 174
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 269 WLPLHTIAASGDFYLLDNLLKHNINVNAL----DKDGLPAIHKAILSKKHAIINYLLRNS 324
W PLH A GD + LL ++VNAL G+ A+H A +++ LL
Sbjct: 30 WNPLHIKARKGDLKSVKQLLDQGMDVNALAWGPKSKGVSALHLAAEGGHIEVMDLLLERG 89
Query: 325 AN--PFIHDKYGWTPLHLAVQTQRTDIVKLLLIKGA 358
AN GWTPLH A + ++ + VK L+ GA
Sbjct: 90 ANIDAKTWGSCGWTPLHAAAKERKREAVKFLVENGA 125
>AT5G37500.1 | chr5:14889758-14894883 REVERSE LENGTH=821
Length = 820
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 270 LPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSKKHAIINYLLRNSANPFI 329
L +++ A GDFY L +L++ + N D DG +H A I +L++ + +
Sbjct: 533 LKVNSAAFQGDFYQLKSLIRSGADPNKTDYDGRSPLHLAACRGYEDITLFLIQEGVDVNL 592
Query: 330 HDKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGF 368
DK+G TPL AV+ + ++ LL+ +GA L+ F
Sbjct: 593 KDKFGHTPLFEAVKAGQEGVIGLLVKEGASFNLEDSGNF 631
>AT5G02620.1 | chr5:589666-591536 FORWARD LENGTH=525
Length = 524
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 266 SSKWLPLHTIAASGDFYLLDNLLKHNINVNALDK-DGLPAIHKAILSKKHAIINYLLRNS 324
SSK LHT A+ G ++ LL +++ A+ + +G A+H A + I+ L+
Sbjct: 123 SSKTTALHTAASQGHGEIVCFLLDKGVDLAAIARSNGKTALHSAARNGHTVIVKKLIEKK 182
Query: 325 ANPFIH-DKYGWTPLHLAVQTQRTDIVKLL------LIKGADRTLKTQDGFTPLELCLR 376
A DK G T LH+AV+ Q T+IV +L LI AD G TPL + +R
Sbjct: 183 AGMVTRVDKKGQTALHMAVKGQNTEIVDVLMEADGSLINSAD-----NKGNTPLHIAVR 236
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 253 LLNKRVPDLEAATSSKWLPLHTIAASGDFYLLDNLLKHNIN-VNALDKDGLPAIHKAILS 311
LL+K V A S+ LH+ A +G ++ L++ V +DK G A+H A+
Sbjct: 144 LLDKGVDLAAIARSNGKTALHSAARNGHTVIVKKLIEKKAGMVTRVDKKGQTALHMAVKG 203
Query: 312 KKHAIINYLLR------NSANPFIHDKYGWTPLHLAVQTQRTDIVKLLL-IKGADRTLKT 364
+ I++ L+ NSA D G TPLH+AV+ R +IV+ +L R
Sbjct: 204 QNTEIVDVLMEADGSLINSA-----DNKGNTPLHIAVRKNRAEIVQTVLKYCEVSRVAVN 258
Query: 365 QDGFTPLELCLRLGHHARTYELIKLLKSFRL 395
+ G T L++ + G H E++ LL+ +
Sbjct: 259 KSGETALDIAEKTGLH----EIVPLLQKIGM 285
>AT4G32500.1 | chr4:15681122-15685214 FORWARD LENGTH=881
Length = 880
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 270 LPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSKKHAIINYLLRNSANPFI 329
L L AA GD LL LLK N N DK+G A+H A + LL + A+P I
Sbjct: 544 LSLCFAAARGDDLLLHQLLKRGSNPNETDKNGRTALHIAASKGSQYCVVLLLEHGADPNI 603
Query: 330 HDKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLELCLRLGHH 380
D G PL A+ + + KLL GA + T F+ CL +G +
Sbjct: 604 RDSEGSVPLWEAIIGRHEENAKLLSENGATLSFDTVGYFS----CLAVGQN 650
>AT3G04710.1 | chr3:1278229-1280942 FORWARD LENGTH=457
Length = 456
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 272 LHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSKKHAIINYLLRNSANPFIHD 331
LH A +G+ LL LL + V++ + G P I A +K+A + LL ++ANP
Sbjct: 126 LHHAAGTGEIELLKELLSRGVPVDSESESGTPLIWAAGHDQKNA-VEVLLEHNANPNAET 184
Query: 332 KYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFTPLELCLRLGHHARTYELIK-LL 390
+ TPL AV ++LL+ GA + G TPL + +G+ ELI LL
Sbjct: 185 EDNITPLLSAVAAGSLSCLELLVKAGAKANV-FAGGATPLHIAADIGN----LELINCLL 239
Query: 391 KSFRLPKQHD 400
K+ P Q D
Sbjct: 240 KAGADPNQKD 249
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 251 KVLLNKRVP-DLEAATSSKWLPLHTIAASGDFYLLDNLLKHNINVNALDKDGLPAIHKAI 309
K LL++ VP D E+ + + PL A ++ LL+HN N NA +D + + A+
Sbjct: 139 KELLSRGVPVDSESESGT---PLIWAAGHDQKNAVEVLLEHNANPNAETEDNITPLLSAV 195
Query: 310 LSKKHAIINYLLRNSANPFIHDKYGWTPLHLAVQTQRTDIVKLLLIKGADRTLKTQDGFT 369
+ + + L++ A + G TPLH+A +++ LL GAD K ++G
Sbjct: 196 AAGSLSCLELLVKAGAKANVF-AGGATPLHIAADIGNLELINCLLKAGADPNQKDEEGNR 254
Query: 370 PLEL 373
PLE+
Sbjct: 255 PLEV 258
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,720,147
Number of extensions: 299007
Number of successful extensions: 1056
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 1044
Number of HSP's successfully gapped: 24
Length of query: 408
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 307
Effective length of database: 8,337,553
Effective search space: 2559628771
Effective search space used: 2559628771
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)