Os03g0134000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os03g0134000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.09 | 0.393 | 7.51 | 0.856 | 0.365 | -1.32 | 0.134 | 0.161 | 3.24 | 15.3 | 15.01 | 290 | -- | -- |
| 70.08 | 0.39 | 7.51 | 0.84 | 0.353 | -1.33 | 0.139 | -- | 3.24 | 15.4 | 14.9 | 315 | -- | -- |
| 70.09 | 0.39 | 7.51 | 0.877 | 0.36 | -1.32 | -- | 0.272 | 3.25 | 15.5 | 15.1 | 315 | -- | -- |
| 70.14 | 0.39 | 7.51 | 0.833 | 0.355 | -1.31 | -- | -- | 3.23 | 15.5 | 15 | 316 | -- | -- |
| 71.56 | 0.394 | 7.52 | 0.794 | -- | -1.1 | -- | -0.21 | 3.21 | -- | 14.8 | 776 | -- | -- |
| 89 | 0.442 | 7.55 | 0.531 | 0.156 | -- | 0.35 | -- | 3.04 | 9.2 | -- | -- | -- | -- |
| 89.42 | 0.443 | 7.55 | 0.544 | 0.154 | -- | -- | -- | 3.04 | 9.55 | -- | -- | -- | -- |
| 71.6 | 0.394 | 7.52 | 0.828 | -- | -1.09 | -- | -- | 3.21 | -- | 14.8 | 777 | -- | -- |
| 86.61 | 0.433 | 7.54 | -- | 0.228 | -0.94 | -- | -- | 3.09 | 15 | 11.98 | 341 | -- | -- |
| 90.82 | 0.445 | 7.55 | 0.543 | -- | -- | -- | -- | 3.04 | -- | -- | -- | -- | -- |
| 97.22 | 0.461 | 7.56 | -- | 0.153 | -- | -- | -- | 2.98 | 9.28 | -- | -- | -- | -- |
| 87.58 | 0.436 | 7.55 | -- | -- | -0.757 | -- | -- | 3.08 | -- | 16.01 | 612 | -- | -- |
| 98.58 | 0.463 | 7.57 | -- | -- | -- | -- | -- | 2.98 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.85 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 69.46 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 6 | 69.75 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 9 | 69.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 13 | 70.02 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 15 | 70.15 | temperature | 15.0 | 270 | > th | dose dependent | no | NA | NA |
| 19 | 70.18 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 20 | 70.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 22 | 70.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 23 | 70.25 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 36 | 70.38 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 39 | 70.39 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 53 | 70.51 | temperature | 15.0 | 30 | > th | dose dependent | no | NA | NA |
| 60 | 70.54 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 61 | 70.54 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 74 | 70.61 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 82 | 70.64 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 105 | 70.72 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 110 | 70.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 146 | 70.88 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 148 | 70.89 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 150 | 70.90 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 178 | 70.98 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 181 | 70.99 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 2 | 18 |
| 256 | 71.18 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 263 | 71.20 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 306 | 71.32 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 320 | 71.35 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 330 | 71.38 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 352 | 71.42 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 353 | 71.42 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 367 | 71.45 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 490 | 71.71 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 495 | 71.72 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 508 | 71.74 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 550 | 71.83 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 586 | 71.91 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 717 | 72.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 720 | 72.17 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 727 | 72.19 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 767 | 72.24 | temperature | 10.0 | 720 | > th | dose dependent | sin | 3 | NA |
| 774 | 72.25 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 831 | 72.35 | temperature | 25.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 840 | 72.36 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 843 | 72.36 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 879 | 72.41 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 891 | 72.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 910 | 72.46 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 944 | 72.49 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 969 | 72.52 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 980 | 72.53 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |