Os03g0129000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phospho-ethanolamine N-methyltransferase family protein.
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Os03g0129000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phospho-ethanolamine N-methyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7.69 | 0.13 | 10.1 | 0.638 | 0.159 | -0.0821 | -0.334 | 1.46 | 0.167 | 4.53 | 20.4 | 1381 | -- | -- |
| 9.68 | 0.146 | 10.1 | 0.207 | 0.155 | -0.0294 | -0.257 | -- | 0.0504 | 4.81 | 18.51 | 368 | -- | -- |
| 7.91 | 0.131 | 10.1 | 0.631 | 0.152 | -0.0851 | -- | 1.46 | 0.168 | 4.72 | 20.9 | 1613 | -- | -- |
| 9.6 | 0.144 | 10.1 | 0.168 | 0.146 | 0.107 | -- | -- | 0.0648 | 5.84 | 29.87 | 3951 | -- | -- |
| 9.15 | 0.141 | 10.1 | 0.687 | -- | -0.107 | -- | 1.61 | 0.185 | -- | 21.4 | 1660 | -- | -- |
| 9.69 | 0.146 | 10.1 | 0.2 | 0.163 | -- | -0.249 | -- | 0.0455 | 4.69 | -- | -- | -- | -- |
| 9.85 | 0.147 | 10.1 | 0.202 | 0.162 | -- | -- | -- | 0.0468 | 4.75 | -- | -- | -- | -- |
| 10.71 | 0.152 | 10.1 | 0.066 | -- | 0.144 | -- | -- | 0.000242 | -- | 32.2 | 47520 | -- | -- |
| 9.55 | 0.144 | 10.2 | -- | 0.156 | 0.163 | -- | -- | -0.0331 | 4.82 | 28.96 | 47520 | -- | -- |
| 11.23 | 0.157 | 10.1 | 0.208 | -- | -- | -- | -- | 0.051 | -- | -- | -- | -- | -- |
| 10.93 | 0.155 | 10.1 | -- | 0.165 | -- | -- | -- | 0.0243 | 4.72 | -- | -- | -- | -- |
| 10.77 | 0.153 | 10.2 | -- | -- | 0.177 | -- | -- | -0.0141 | -- | 32.3 | 47520 | -- | -- |
| 12.37 | 0.164 | 10.1 | -- | -- | -- | -- | -- | 0.0279 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.60 | temperature | 25 | 1440 | > th | dose dependent | sin | 13 | NA |
| 4 | 7.63 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 12 |
| 6 | 7.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 10 |
| 20 | 7.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 100 | 7.72 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 101 | 7.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 125 | 7.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 126 | 7.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 142 | 7.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 22 |
| 281 | 7.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 288 | 7.79 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 12 |
| 344 | 7.81 | temperature | 25 | 1440 | > th | dose independent | sin | 14 | NA |
| 360 | 7.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 361 | 7.82 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 385 | 7.83 | wind | 3 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 460 | 7.86 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 11 |
| 462 | 7.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 473 | 7.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 593 | 7.90 | temperature | 25 | 1440 | < th | dose independent | sin | 15 | NA |
| 666 | 7.92 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 706 | 7.93 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 747 | 7.94 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 748 | 7.94 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 778 | 7.95 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 784 | 7.95 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 821 | 7.96 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 847 | 7.96 | temperature | 25 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 851 | 7.96 | temperature | 25 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 886 | 7.97 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 22 |
| 918 | 7.98 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 919 | 7.98 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 939 | 7.98 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 20 |
| 947 | 7.98 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 952 | 7.98 | temperature | 25 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 956 | 7.98 | temperature | 25 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 968 | 7.98 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 971 | 7.98 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 16 |
| 978 | 7.99 | temperature | 25 | 1440 | > th | dose independent | sin | 7 | NA |
| 989 | 7.99 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 20 |