Os03g0126600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os03g0126600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.7 | 0.464 | 10.9 | -1.53 | 0.498 | -0.0134 | 0.14 | 2.71 | -0.538 | 1.24 | 40.03 | 714 | -- | -- |
| 106.06 | 0.48 | 10.9 | -1.58 | 0.526 | 0.301 | -0.0712 | -- | -0.597 | 1.04 | 33.5 | 6310 | -- | -- |
| 97.78 | 0.461 | 10.9 | -1.54 | 0.499 | -0.012 | -- | 2.67 | -0.539 | 1.24 | 40 | 714 | -- | -- |
| 104.86 | 0.477 | 10.9 | -1.61 | 0.506 | 0.374 | -- | -- | -0.674 | 0.98 | 29.98 | 7621 | -- | -- |
| 111.97 | 0.493 | 10.9 | -1.53 | -- | -0.157 | -- | 2.94 | -0.534 | -- | 43.34 | 604 | -- | -- |
| 108.03 | 0.487 | 10.9 | -1.7 | 0.501 | -- | -0.0955 | -- | -0.581 | 0.973 | -- | -- | -- | -- |
| 108.06 | 0.487 | 10.9 | -1.69 | 0.501 | -- | -- | -- | -0.58 | 0.91 | -- | -- | -- | -- |
| 106.25 | 0.482 | 10.9 | -1.68 | -- | -0.737 | -- | -- | -0.579 | -- | -0.03524 | 8377 | -- | -- |
| 146.79 | 0.564 | 10.9 | -- | 0.435 | 1.05 | -- | -- | -0.266 | 1.06 | 56.3 | 28412 | -- | -- |
| 123.69 | 0.52 | 10.9 | -1.68 | -- | -- | -- | -- | -0.571 | -- | -- | -- | -- | -- |
| 183.77 | 0.634 | 10.9 | -- | 0.474 | -- | -- | -- | -0.391 | 0.754 | -- | -- | -- | -- |
| 159.06 | 0.587 | 10.8 | -- | -- | 1.03 | -- | -- | -0.127 | -- | 57.95 | 47520 | -- | -- |
| 197.8 | 0.656 | 10.9 | -- | -- | -- | -- | -- | -0.385 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.25 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 3 | 96.43 | radiation | 30.0 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 4 | 96.44 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 6 | 96.53 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 7 | 96.60 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 27 | 96.73 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 17 |
| 29 | 96.78 | radiation | 40.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 37 | 96.95 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 72 | 97.24 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 9 | 14 |
| 73 | 97.25 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 87 | 97.40 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 89 | 97.40 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 96 | 97.51 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 17 |
| 144 | 97.65 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 147 | 97.66 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 11 | 16 |
| 151 | 97.68 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 152 | 97.69 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 193 | 97.73 | radiation | 40.0 | 720 | > th | dose dependent | no | NA | NA |
| 335 | 97.78 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 337 | 97.78 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 377 | 97.85 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 398 | 97.87 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 401 | 97.87 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 8 | 17 |
| 403 | 97.88 | humidity | 80.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 410 | 97.90 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 11 | 13 |
| 411 | 97.91 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 15 |
| 412 | 97.92 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 414 | 97.93 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 418 | 97.94 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 424 | 97.96 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 427 | 97.97 | radiation | 40.0 | 720 | > th | dose independent | rect. | 14 | 21 |
| 431 | 97.98 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 19 | NA |
| 435 | 97.99 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 436 | 97.99 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 437 | 98.00 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 451 | 98.06 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 602 | 98.12 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 621 | 98.14 | radiation | 40.0 | 720 | > th | dose independent | sin | 12 | NA |
| 623 | 98.14 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 16 |
| 624 | 98.14 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 644 | 98.15 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 20 |
| 653 | 98.17 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 659 | 98.19 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 663 | 98.20 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 669 | 98.24 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 671 | 98.25 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 674 | 98.26 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 7 |
| 685 | 98.29 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 686 | 98.29 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 689 | 98.30 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 695 | 98.31 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 2 | 17 |
| 702 | 98.33 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 703 | 98.33 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 711 | 98.35 | humidity | 80.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 714 | 98.36 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 723 | 98.36 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 19 |
| 724 | 98.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 727 | 98.36 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 17 |
| 729 | 98.37 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 5 |
| 745 | 98.38 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 752 | 98.40 | humidity | 60.0 | 720 | > th | dose independent | sin | 15 | NA |
| 770 | 98.40 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 15 | 3 |
| 791 | 98.41 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 792 | 98.41 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 795 | 98.42 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 801 | 98.43 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 805 | 98.44 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 811 | 98.44 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 17 |
| 822 | 98.46 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 824 | 98.46 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 18 |
| 830 | 98.47 | humidity | 60.0 | 720 | > th | dose independent | rect. | 13 | 17 |
| 840 | 98.49 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 841 | 98.49 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 4 |
| 866 | 98.50 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 869 | 98.51 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 22 |
| 870 | 98.51 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 15 |
| 888 | 98.53 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 9 |
| 919 | 98.56 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 924 | 98.57 | temperature | 30.0 | 720 | > th | dose independent | rect. | 17 | 21 |
| 961 | 98.59 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 962 | 98.59 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 978 | 98.60 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 7 |
| 992 | 98.61 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 20 |