Os03g0125800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF21 domain containing protein.
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Os03g0125800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF21 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.87 | 0.244 | 8.87 | 0.422 | 0.638 | -1.1 | -1.28 | 0.288 | 0.13 | 7.52 | 19.43 | 57 | -- | -- |
| 26.93 | 0.242 | 8.87 | 0.373 | 0.641 | -1.08 | -1.27 | -- | 0.112 | 7.45 | 19.3 | 57 | -- | -- |
| 31.31 | 0.261 | 8.87 | 0.378 | 0.648 | -1.04 | -- | 0.258 | 0.12 | 7.33 | 19.58 | 57 | -- | -- |
| 31.33 | 0.262 | 8.87 | 0.32 | 0.696 | -1.04 | -- | -- | 0.109 | 7.41 | 19.3 | 57 | -- | -- |
| 44.87 | 0.312 | 8.86 | 0.444 | -- | -1.29 | -- | 0.639 | 0.174 | -- | 20.6 | 282 | -- | -- |
| 45.53 | 0.316 | 8.91 | 0.108 | 0.871 | -- | -0.854 | -- | -0.0706 | 5.95 | -- | -- | -- | -- |
| 47.18 | 0.322 | 8.91 | 0.0996 | 0.868 | -- | -- | -- | -0.0679 | 5.74 | -- | -- | -- | -- |
| 45.82 | 0.315 | 8.88 | 0.384 | -- | -1.24 | -- | -- | 0.151 | -- | 20.6 | 269 | -- | -- |
| 33.78 | 0.272 | 8.88 | -- | 0.707 | -0.922 | -- | -- | 0.0564 | 7.18 | 19.8 | 53 | -- | -- |
| 86.24 | 0.434 | 8.92 | 0.127 | -- | -- | -- | -- | -0.0474 | -- | -- | -- | -- | -- |
| 47.44 | 0.322 | 8.91 | -- | 0.869 | -- | -- | -- | -0.079 | 5.74 | -- | -- | -- | -- |
| 49.67 | 0.328 | 8.89 | -- | -- | -1.16 | -- | -- | 0.0989 | -- | 20.9 | 267 | -- | -- |
| 86.67 | 0.435 | 8.93 | -- | -- | -- | -- | -- | -0.0615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.30 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 20 |
| 3 | 25.64 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 7 | 25.78 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 9 | 25.93 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 47 | 26.94 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 50 | 27.02 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 60 | 27.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 77 | 27.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 78 | 27.42 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 89 | 27.53 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 20 |
| 99 | 27.63 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 122 | 27.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 128 | 27.82 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 148 | 28.02 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 155 | 28.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 191 | 28.34 | temperature | 25 | 270 | > th | dose independent | rect. | 18 | 23 |
| 206 | 28.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 227 | 28.57 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 22 |
| 228 | 28.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 255 | 28.71 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 21 |
| 301 | 28.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 305 | 28.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 322 | 29.07 | temperature | 20 | 270 | > th | dose dependent | sin | 8 | NA |
| 349 | 29.20 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 397 | 29.47 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 23 |
| 412 | 29.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 415 | 29.55 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 23 |
| 418 | 29.58 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 427 | 29.61 | temperature | 25 | 270 | < th | dose independent | rect. | 17 | 23 |
| 493 | 29.89 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 538 | 30.05 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 540 | 30.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 546 | 30.07 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 547 | 30.08 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 23 |
| 579 | 30.22 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 23 |
| 831 | 31.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 16 |
| 843 | 31.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 850 | 31.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 898 | 31.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |