BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0125800 Os03g0125800|AK102496
(518 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47330.1 | chr1:17351149-17353739 FORWARD LENGTH=528 495 e-140
AT5G52790.1 | chr5:21391740-21394327 REVERSE LENGTH=501 476 e-134
AT2G14520.1 | chr2:6182362-6184648 REVERSE LENGTH=424 474 e-134
AT4G33700.1 | chr4:16176547-16179188 REVERSE LENGTH=425 458 e-129
AT4G14240.1 | chr4:8204712-8207273 REVERSE LENGTH=495 397 e-111
AT4G14230.1 | chr4:8200850-8203130 REVERSE LENGTH=496 390 e-108
AT1G03270.1 | chr1:799191-802436 FORWARD LENGTH=500 376 e-104
AT3G13070.1 | chr3:4191511-4195112 REVERSE LENGTH=662 64 1e-10
AT1G55930.1 | chr1:20918895-20922133 FORWARD LENGTH=654 61 1e-09
>AT1G47330.1 | chr1:17351149-17353739 FORWARD LENGTH=528
Length = 527
Score = 495 bits (1274), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/513 (51%), Positives = 345/513 (67%), Gaps = 38/513 (7%)
Query: 1 MSQHAVCCGAMFWVYLMSCVGLVMFAXXXXXXXXXXXXXXXVDLEVLAKAGTPTDKDNAA 60
MS CCG F +Y++ + LV FA VDLEVL K+G P D+ NA
Sbjct: 1 MSSDIPCCGTTFSLYVVIIIALVAFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQDRINAG 60
Query: 61 RILPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVPSFGAILISVTLILAFGEIMPQAIC 120
+I PVVKNQHLLLCTLLIGNS+AMEALPIFLD +VP + AIL+SVTLIL FGEIMPQA+C
Sbjct: 61 KIFPVVKNQHLLLCTLLIGNSMAMEALPIFLDKIVPPWLAILLSVTLILVFGEIMPQAVC 120
Query: 121 TRYGLSVGAKAAPVVRVLLIVFFPVAYPISKLLDWVLGKGHVALMRRAELKTLVDMHGNE 180
TRYGL VGA AP VRVLL++FFP++YPISK+LDW+LGKGH L+RRAELKT V+ HGNE
Sbjct: 121 TRYGLKVGAIMAPFVRVLLVLFFPISYPISKVLDWMLGKGHGVLLRRAELKTFVNFHGNE 180
Query: 181 AGKGGELTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKLDLHTMGMIMTKGHSR 240
AGKGG+LT DET+IITGALE+T+KTAKDAMTPIS FSL+++ L+L T+ IM+ GHSR
Sbjct: 181 AGKGGDLTTDETSIITGALELTEKTAKDAMTPISNAFSLELDTPLNLETLNTIMSVGHSR 240
Query: 241 VPIYSGTPNNIIGLILVKNLITCQPEDEVPIRNVTIRKIPRVSDDLPLYDILNEFQKGHS 300
VP+Y P +IIGLILVKNL+ EVP+R +++RKIPRVS+ +PLYDILNEFQKGHS
Sbjct: 241 VPVYFRNPTHIIGLILVKNLLAVDARKEVPLRKMSMRKIPRVSETMPLYDILNEFQKGHS 300
Query: 301 HMAVVVRRIKEPGASIEKTYSD---RSDYKTNSD---------RSDYKINHRDAHA--DG 346
H+AVV + + E S E + + R + KT + ++ ++++ ++ G
Sbjct: 301 HIAVVYKDLDEQEQSPETSENGIERRKNKKTKDELFKDSCRKPKAQFEVSEKEVFKIETG 360
Query: 347 LSPSRVSIAGSRRSNIEKNGEVRLYKKSEKKRDN-----ILDFNSGPLPSYSLDQEAVGI 401
+ S S G + + +G+ L KKR ILD + P+P + ++E VG+
Sbjct: 361 DAKSGKSENGEEQ---QGSGKTSLLAAPAKKRHRGCSFCILDIENTPIPDFPTNEEVVGV 417
Query: 402 ITMEDVMEQLLQEDILDETDEYVDVHNKIKINM------LP-----LGKSLSPTISPSNG 450
ITMEDV+E+LLQE+ILDETDEYV++HN+I++NM LP + +S S + SP+
Sbjct: 418 ITMEDVIEELLQEEILDETDEYVNIHNRIRVNMHASPENLPSVITSITQSSSGSTSPNQT 477
Query: 451 PHSQGLRRTPMTSPLSSYHHGGSILRSPASNNP 483
H +P T P +S S R P+ ++P
Sbjct: 478 SHMATPDSSPTTKPSNS-----SPTRKPSVSSP 505
>AT5G52790.1 | chr5:21391740-21394327 REVERSE LENGTH=501
Length = 500
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/504 (53%), Positives = 335/504 (66%), Gaps = 63/504 (12%)
Query: 7 CCGAMFWVYLMSCVGLVMFAXXXXXXXXXXXXXXXVDLEVLAKAGTPTDKDNAARILPVV 66
CC MFWVYL+ CV LV+FA V+LEV+ KAG P D+ NA +ILP+V
Sbjct: 8 CCETMFWVYLLVCVALVVFAGLMSGLTLGLMSLSIVELEVMIKAGEPHDRKNAEKILPLV 67
Query: 67 KNQHLLLCTLLIGNSLAMEALPIFLDSLVPSFGAILISVTLILAFGEIMPQAICTRYGLS 126
KNQHLLLCTLLIGN+LAMEALPIF+DSL+P++GAILISVTLILAFGEI+PQA+C+RYGLS
Sbjct: 68 KNQHLLLCTLLIGNALAMEALPIFVDSLLPAWGAILISVTLILAFGEIIPQAVCSRYGLS 127
Query: 127 VGAKAAPVVRVLLIVFFPVAYPISKLLDWVLGKGHVALMRRAELKTLVDMHGNEAGKGGE 186
+GAK + +VR+++IVFFP++YPISKLLD +LGK H L+ RAELK+LV MHGNEAGKGGE
Sbjct: 128 IGAKLSFLVRLIIIVFFPLSYPISKLLDLLLGKRHSTLLGRAELKSLVYMHGNEAGKGGE 187
Query: 187 LTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKLDLHTMGMIMTKGHSRVPIYSG 246
LTHDETTII+GAL+M+QK+AKDAMTP+S+ FSLDIN KLD TMG+I + GHSR+PIYS
Sbjct: 188 LTHDETTIISGALDMSQKSAKDAMTPVSQIFSLDINFKLDEKTMGLIASAGHSRIPIYSV 247
Query: 247 TPNNIIGLILVKNLITCQPEDEVPIRNVTIRKIPRVSDDLPLYDILNEFQKGHSHMAVVV 306
PN IIG ILVKNLI +PEDE IR++ IR++P+V +LPLYDILN FQ G SHMA VV
Sbjct: 248 NPNVIIGFILVKNLIKVRPEDETSIRDLPIRRMPKVDLNLPLYDILNIFQTGRSHMAAVV 307
Query: 307 RRIKEPGASIEKTYSDRSDYKTNSDRSDYKIN---HRDAHADGLSPSRVSIAGSRRSNIE 363
++ TN+ + IN ++DA+ P+ S S +S I
Sbjct: 308 --------------GTKNHTNTNTPVHEKSINGSPNKDANVFLSIPALNSSETSHQSPI- 352
Query: 364 KNGEVRLYKKSEKKRDNILDFNSGPLPSYSLDQEAVGIITMEDVMEQLLQEDILDETDEY 423
+ D+I D D+E +GIIT+EDVME+L+QE+I DETD+Y
Sbjct: 353 ------------RYIDSISDE----------DEEVIGIITLEDVMEELIQEEIYDETDQY 390
Query: 424 VDVHNKIKINMLPLGKS---------LSPTISP------SNGPHSQGLRRTPMTSPLSSY 468
V++H +I INM G S L+ ISP S L R+P+ SP Y
Sbjct: 391 VELHKRITINMPMSGNSPETATWASELASPISPYRSSLLSPSIMISTLLRSPINSP---Y 447
Query: 469 HHGGSILRSP---ASNNPQSPGTL 489
H S+L P AS QSP L
Sbjct: 448 RH--SLLLRPTLHASPPAQSPSIL 469
>AT2G14520.1 | chr2:6182362-6184648 REVERSE LENGTH=424
Length = 423
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/432 (56%), Positives = 308/432 (71%), Gaps = 18/432 (4%)
Query: 1 MSQHAVCCGAMFWVYLMSCVGLVMFAXXXXXXXXXXXXXXXVDLEVLAKAGTPTDKDNAA 60
M+ CCG F++++ V LV+FA VDLEVLAK+GTP D+ +AA
Sbjct: 1 MAVEYECCGTSFFIHIAVIVLLVLFAGLMSGLTLGLMSMSLVDLEVLAKSGTPRDRIHAA 60
Query: 61 RILPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVPSFGAILISVTLILAFGEIMPQAIC 120
+ILPVVKNQHLLLCTLLI N+ AMEALPIFLD+LV ++GAILISVTLIL FGEI+PQ++C
Sbjct: 61 KILPVVKNQHLLLCTLLICNAAAMEALPIFLDALVTAWGAILISVTLILLFGEIIPQSVC 120
Query: 121 TRYGLSVGAKAAPVVRVLLIVFFPVAYPISKLLDWVLGKGHVALMRRAELKTLVDMHGNE 180
+R+GL++GA AP VRVL+ + PVA+PISKLLD++LG G VAL RRAELKTLVD+HGNE
Sbjct: 121 SRHGLAIGATVAPFVRVLVWICLPVAWPISKLLDFLLGHGRVALFRRAELKTLVDLHGNE 180
Query: 181 AGKGGELTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKLDLHTMGMIMTKGHSR 240
AGKGGELTHDETTII GALE+++K AKDAMTPIS+TF +DINAKLD M +I+ KGHSR
Sbjct: 181 AGKGGELTHDETTIIAGALELSEKMAKDAMTPISDTFVIDINAKLDRDLMNLILDKGHSR 240
Query: 241 VPIYSGTPNNIIGLILVKNLITCQPEDEVPIRNVTIRKIPRVSDDLPLYDILNEFQKGHS 300
VP+Y NIIGL+LVKNL+T P++E+ ++NVTIR+IPRV + LPLYDILNEFQKGHS
Sbjct: 241 VPVYYEQRTNIIGLVLVKNLLTINPDEEIQVKNVTIRRIPRVPETLPLYDILNEFQKGHS 300
Query: 301 HMAVVVRR------IKEPGASIEKTYSDRSDYKTNSDRSDYKINHRDAHADGLS-PSRVS 353
HMAVVVR+ ++ A+ E R D + K+ R + S P+R +
Sbjct: 301 HMAVVVRQCDKIHPLQSNDAANETVNEVRVDVDYERSPQETKLKRRRSLQKWKSFPNRAN 360
Query: 354 IAGSRRSNIEKNGEVRLYKKSEKKRDNILDFNSGPLPSYSLDQEAVGIITMEDVMEQLLQ 413
GSR K+ + +IL N PLP +++AVGIITMEDV+E+LLQ
Sbjct: 361 SLGSRSKRWSKDNDA-----------DILQLNEHPLPKLDEEEDAVGIITMEDVIEELLQ 409
Query: 414 EDILDETDEYVD 425
E+I DETD + +
Sbjct: 410 EEIFDETDHHFE 421
>AT4G33700.1 | chr4:16176547-16179188 REVERSE LENGTH=425
Length = 424
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/433 (55%), Positives = 298/433 (68%), Gaps = 19/433 (4%)
Query: 1 MSQHAVCCGAMFWVYLMSCVGLVMFAXXXXXXXXXXXXXXXVDLEVLAKAGTPTDKDNAA 60
M+ VCC F++++ V LV+FA VDLEVLAK+GTP + AA
Sbjct: 1 MAVEYVCCSPNFFIHIAVIVFLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPEHRKYAA 60
Query: 61 RILPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVPSFGAILISVTLILAFGEIMPQAIC 120
+ILPVVKNQHLLL TLLI N+ AME LPIFLD LV ++GAILISVTLIL FGEI+PQ+IC
Sbjct: 61 KILPVVKNQHLLLVTLLICNAAAMETLPIFLDGLVTAWGAILISVTLILLFGEIIPQSIC 120
Query: 121 TRYGLSVGAKAAPVVRVLLIVFFPVAYPISKLLDWVLGKGHVALMRRAELKTLVDMHGNE 180
+RYGL++GA AP VRVL+ + PVA+PISKLLD++LG AL RRAELKTLVD HGNE
Sbjct: 121 SRYGLAIGATVAPFVRVLVFICLPVAWPISKLLDFLLGHRRAALFRRAELKTLVDFHGNE 180
Query: 181 AGKGGELTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKLDLHTMGMIMTKGHSR 240
AGKGGELTHDETTII GALE+++K KDAMTPIS+ F +DINAKLD M +I+ KGHSR
Sbjct: 181 AGKGGELTHDETTIIAGALELSEKMVKDAMTPISDIFVIDINAKLDRDLMNLILEKGHSR 240
Query: 241 VPIYSGTPNNIIGLILVKNLITCQPEDEVPIRNVTIRKIPRVSDDLPLYDILNEFQKGHS 300
VP+Y P NIIGL+LVKNL+T P++E+P++NVTIR+IPRV + LPLYDILNEFQKG S
Sbjct: 241 VPVYYEQPTNIIGLVLVKNLLTINPDEEIPVKNVTIRRIPRVPEILPLYDILNEFQKGLS 300
Query: 301 HMAVVVRR------IKEPGASIEKTYSDRSDYKTNSDRSDYKINHRDAHADGLSPSRV-S 353
HMAVVVR+ + S+++ D T + + R P+R S
Sbjct: 301 HMAVVVRQCDKIHPLPSKNGSVKEARVDVDSEGTPTPQERMLRTKRSLQKWKSFPNRASS 360
Query: 354 IAGSRRSNIEKNGEVRLYKKSEKKRD-NILDFNSGPLPSYSLDQEAVGIITMEDVMEQLL 412
G +S KK K D +IL N PLP + ++EAVGIITMEDV+E+LL
Sbjct: 361 FKGGSKS-----------KKWSKDNDADILQLNGNPLPKLAEEEEAVGIITMEDVIEELL 409
Query: 413 QEDILDETDEYVD 425
QE+I DETD + +
Sbjct: 410 QEEIFDETDHHFE 422
>AT4G14240.1 | chr4:8204712-8207273 REVERSE LENGTH=495
Length = 494
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/431 (48%), Positives = 281/431 (65%), Gaps = 20/431 (4%)
Query: 4 HAVCCGAMFWVYL--MSCVGLVMFAXXXXXXXXXXXXXXXVDLEVLAKAGTPTDKDNAAR 61
A+ G+ W+ +SC LV+FA V+LE+L ++GTP +K AA
Sbjct: 26 EAIPFGSFEWITYAGISCF-LVLFAGIMSGLTLGLMSLGLVELEILQRSGTPNEKKQAAA 84
Query: 62 ILPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVPSFGAILISVTLILAFGEIMPQAICT 121
I PVV+ QH LL TLL+ N++AME LPI+LD L + AI++SVT +LAFGE++PQAICT
Sbjct: 85 IFPVVQKQHQLLVTLLLCNAMAMEGLPIYLDKLFNEYVAIILSVTFVLAFGEVIPQAICT 144
Query: 122 RYGLSVGAKAAPVVRVLLIVFFPVAYPISKLLDWVLGKGHVALMRRAELKTLVDMHGNEA 181
RYGL+VGA +VR+L+ + +P+A+PI K+LD VLG AL RRA+LK LV +H EA
Sbjct: 145 RYGLAVGANFVWLVRILMTLCYPIAFPIGKILDLVLGHND-ALFRRAQLKALVSIHSQEA 203
Query: 182 GKGGELTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKLDLHTMGMIMTKGHSRV 241
GKGGELTHDETTII+GAL++T+KTA++AMTPI TFSLD+N+KLD MG I+ +GHSRV
Sbjct: 204 GKGGELTHDETTIISGALDLTEKTAQEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRV 263
Query: 242 PIYSGTPNNIIGLILVKNLITCQPEDEVPIRNVTIRKIPRVSDDLPLYDILNEFQKGHSH 301
P+YSG P N+IGL+LVK+L+T +PE E + V IR+IPRV D+PLYDILNEFQKG SH
Sbjct: 264 PVYSGNPKNVIGLLLVKSLLTVRPETETLVSAVCIRRIPRVPADMPLYDILNEFQKGSSH 323
Query: 302 MAVVVRRIKEPGASIEKTYSDRSDYKTNSDRSDYKINHRDAHADGLSPSRVSIAGSRRSN 361
MA VV+ + + +D +SD + + R+ + D + + G
Sbjct: 324 MAAVVKVKGKSKVPPSTLLEEHTDESNDSDLTAPLLLKREGNHDNVIVTIDKANGQSFFQ 383
Query: 362 IEKNGEVRLYKKSEKKRDNILDFNSGPLPSYSLDQEAVGIITMEDVMEQLLQEDILDETD 421
++G SE D E +GIIT+EDV E+LLQE+I+DETD
Sbjct: 384 NNESGPHGFSHTSEAIEDG----------------EVIGIITLEDVFEELLQEEIVDETD 427
Query: 422 EYVDVHNKIKI 432
EYVDVH +I++
Sbjct: 428 EYVDVHKRIRV 438
>AT4G14230.1 | chr4:8200850-8203130 REVERSE LENGTH=496
Length = 495
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/494 (44%), Positives = 309/494 (62%), Gaps = 32/494 (6%)
Query: 1 MSQHAVCCGAMFWVYL--MSCVGLVMFAXXXXXXXXXXXXXXXVDLEVLAKAGTPTDKDN 58
+ A+ G++ W+ +SC LV+FA V+LE+L ++GTP +K
Sbjct: 22 LQSEAIPFGSLEWITYAGISCF-LVLFAGIMSGLTLGLMSLGLVELEILQRSGTPKEKKQ 80
Query: 59 AARILPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVPSFGAILISVTLILAFGEIMPQA 118
+A I PVV+ QH LL TLL+ N+LAME LPI+LD + + AI++SVT +L GE++PQA
Sbjct: 81 SAAIFPVVQKQHQLLVTLLLFNALAMEGLPIYLDKIFNEYVAIILSVTFVLFVGEVIPQA 140
Query: 119 ICTRYGLSVGAKAAPVVRVLLIVFFPVAYPISKLLDWVLGKGHVALMRRAELKTLVDMHG 178
ICTRYGL+VGA +VR+L+++ +P+++PI+K+LDWVLG L RRA+LK LV +HG
Sbjct: 141 ICTRYGLAVGANLVWLVRILMVLSYPISFPIAKMLDWVLGHND-PLFRRAQLKALVSIHG 199
Query: 179 NEAGKGGELTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKLDLHTMGMIMTKGH 238
AGKGGELTHDETTII+GAL++T+KTA++AMTPI TFSLD+N+KLD M I +GH
Sbjct: 200 EAAGKGGELTHDETTIISGALDLTEKTAQEAMTPIESTFSLDVNSKLDREAMDKIQARGH 259
Query: 239 SRVPIYSGTPNNIIGLILVKNLITCQPEDEVPIRNVTIRKIPRVSDDLPLYDILNEFQKG 298
SRVP+YS P N+IGL+LVK+L+T +PE + V IR+IPRV ++PLYDILNEFQKG
Sbjct: 260 SRVPVYSDNPKNVIGLLLVKSLLTVRPETGTLVSAVGIRRIPRVPANMPLYDILNEFQKG 319
Query: 299 HSHMAVVVR-RIKEPG--ASIEKTYSDRSDYKT-NSDRSDYKINHRDAHADGLSPSRVSI 354
SHMA VV+ + K G +++ + S S+ + NS+ + + R+ + D + R+
Sbjct: 320 SSHMAAVVKVKGKSKGHPSTLHEENSGESNVSSNNSELTAPLLLKREGNHDSVI-VRIDK 378
Query: 355 AGSRRSNIEKNGEVRLYKKSEKKRDNILDFNSGPLPSYSLDQEAVGIITMEDVMEQLLQE 414
A +S I + G SE+ D + +GIIT+EDV E+LLQE
Sbjct: 379 ANG-QSFISEAGRQGFSHTSEEIEDG----------------DVIGIITLEDVFEELLQE 421
Query: 415 DILDETDEYVDVHNKIKINMLPLGKSLSPTISPSN----GPHSQGLRRTPMTS--PLSSY 468
+I+DETDEY+DVH +I++ + S +PS GP G +TP S P
Sbjct: 422 EIVDETDEYIDVHKRIRVATVAAVAISSLARAPSGRRLLGPKGSGGPKTPKASSTPKPDD 481
Query: 469 HHGGSILRSPASNN 482
G++ P NN
Sbjct: 482 KLMGTMTGPPQGNN 495
>AT1G03270.1 | chr1:799191-802436 FORWARD LENGTH=500
Length = 499
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/431 (48%), Positives = 285/431 (66%), Gaps = 30/431 (6%)
Query: 9 GAMFWVYLM--SCVGLVMFAXXXXXXXXXXXXXXXVDLEVLAKAGTPTDKDNAARILPVV 66
G+ +W ++ +C LV+FA V+LE+L ++G+ +K AA ILPVV
Sbjct: 29 GSPWWFVVVGVACF-LVLFAGIMSGLTLGLMSLGLVELEILQQSGSSAEKKQAAAILPVV 87
Query: 67 KNQHLLLCTLLIGNSLAMEALPIFLDSLVPSFGAILISVTLILAFGEIMPQAICTRYGLS 126
K QH LL TLL+ N+ AMEALPI LD + F A+L+SVT +LAFGEI+PQAIC+RYGL+
Sbjct: 88 KKQHQLLVTLLLCNAAAMEALPICLDKIFHPFVAVLLSVTFVLAFGEIIPQAICSRYGLA 147
Query: 127 VGAKAAPVVRVLLIVFFPVAYPISKLLDWVLGKGHVALMRRAELKTLVDMHGNEAGKGGE 186
VGA +VR+L+I+ +P+AYPI K+LD V+G L RRA+LK LV +H EAGKGGE
Sbjct: 148 VGANFLWLVRILMIICYPIAYPIGKVLDAVIGHND-TLFRRAQLKALVSIHSQEAGKGGE 206
Query: 187 LTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKLDLHTMGMIMTKGHSRVPIYSG 246
LTH+ET II+GAL+++QKTA++AMTPI TFSLD+N KLD T+G I+++GHSR+P+Y G
Sbjct: 207 LTHEETMIISGALDLSQKTAEEAMTPIESTFSLDVNTKLDWETIGKILSRGHSRIPVYLG 266
Query: 247 TPNNIIGLILVKNLITCQPEDEVPIRNVTIRKIPRVSDDLPLYDILNEFQKGHSHMAVVV 306
P NIIGL+LVK+L+T + E E P+ +V+IRKIPRV D+PLYDILNEFQKG SHMA VV
Sbjct: 267 NPKNIIGLLLVKSLLTVRAETEAPVSSVSIRKIPRVPSDMPLYDILNEFQKGSSHMAAVV 326
Query: 307 RRIKEPGASIEKTYSDRSDYKTN------SDRSDYKINHRDAHADGLSPSRV-SIAGSRR 359
+ + + + S+ K N S+ + + H ++H + +V +R
Sbjct: 327 KVKDKDKKNNMQLLSNGETPKENMKFYQSSNLTAPLLKH-ESHDVVVDIDKVPKHVKNRG 385
Query: 360 SNIEKNGEVRLYKKSEKKRD--NILDFNSGPLPSYSLDQEAVGIITMEDVMEQLLQEDIL 417
N ++NG V RD +L+ N D E +GIIT+EDV E+LLQ +I+
Sbjct: 386 RNFQQNGTV--------TRDLPCLLEDNE--------DAEVIGIITLEDVFEELLQAEIV 429
Query: 418 DETDEYVDVHN 428
DETD Y+DVH
Sbjct: 430 DETDVYIDVHK 440
>AT3G13070.1 | chr3:4191511-4195112 REVERSE LENGTH=662
Length = 661
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 26/262 (9%)
Query: 72 LLCTLLIGNSLA-MEALPIFLDSLVPSFGAILISVTL------ILAFGEIMPQAICTRYG 124
L T+LIG ++ + A + ++ FG +S IL EI P+++
Sbjct: 213 FLTTILIGTTVVNIAATALVTEAATAIFGEAGVSAATGLMTVAILLLTEITPKSVAVHNA 272
Query: 125 LSVGAKAAPVVRVLLIVFFPVAYPISKL---LDWVLG-KGHVA-LMRRAELKTLVDMHGN 179
V V L +V +PV ++ L + +LG KG + ELK + + G
Sbjct: 273 QEVARIVVRPVAWLSLVLYPVGRIVTYLSMGILKILGLKGRSEPYVTEDELKLM--LRGA 330
Query: 180 EAGKGGELTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKL-DLHTMGMIMTKGH 238
E G + +E +I LE+ ++ MTP+ + ++D +A L D H+M + T +
Sbjct: 331 ELS--GAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASASLVDFHSMWV--THQY 386
Query: 239 SRVPIYSGTPNNIIGLILVKNLIT-CQPED---EVPIRNVTIRKIPRVSDDLPLYDILNE 294
SRVP++ +NI+G+ +L+ Q D + ++ + V D + ++++L E
Sbjct: 387 SRVPVFEQRIDNIVGIAYAMDLLDYVQKGDLLESTSVGDMAHKPAYFVPDSMSVWNLLRE 446
Query: 295 FQKGHSHMAVVVRRIKEPGASI 316
F+ HMAVV + E G +I
Sbjct: 447 FRIRKVHMAVV---LNEYGGTI 465
>AT1G55930.1 | chr1:20918895-20922133 FORWARD LENGTH=654
Length = 653
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 120/263 (45%), Gaps = 28/263 (10%)
Query: 72 LLCTLLIGNSLA-MEALPIFLDSLVPSFGAILISVTL------ILAFGEIMPQAICTRYG 124
L T+LIG ++ + A + + FG +S IL EI P+++
Sbjct: 208 FLTTILIGTTVVNIAATALVTKAATAIFGEAGVSAATGVMTVAILLLTEITPKSVAVHNA 267
Query: 125 LSVGAKAAPVVRVLLIVFFPVAYPISKL---LDWVLG-KGHVA-LMRRAELKTLVDMHGN 179
V V L ++ +PV ++ L + +LG KG + ELK + + G
Sbjct: 268 QEVARIVVRPVAWLSLILYPVGRVVTYLSMGILKILGLKGRSEPYVTEDELKLM--LRGA 325
Query: 180 EAGKGGELTHDETTIITGALEMTQKTAKDAMTPISETFSLDINAKL-DLHTMGMIMTKGH 238
E G + +E +I LE+ ++ MTP+ + ++D + L D H + T +
Sbjct: 326 ELS--GAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDGSGSLVDFHNFWV--THQY 381
Query: 239 SRVPIYSGTPNNIIGLILVKNLITCQPEDEVPIRNVTIRKIPR-----VSDDLPLYDILN 293
SRVP++ +NI+G+ +L+ P+ ++ + + T+ + V D + ++++L
Sbjct: 382 SRVPVFEQRIDNIVGIAYAMDLLDYVPKGKL-LESTTVVDMAHKPAFFVPDSMSVWNLLR 440
Query: 294 EFQKGHSHMAVVVRRIKEPGASI 316
EF+ HMAVV + E G +I
Sbjct: 441 EFRIRKVHMAVV---LNEYGGTI 460
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,621,511
Number of extensions: 458247
Number of successful extensions: 1266
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1254
Number of HSP's successfully gapped: 9
Length of query: 518
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 415
Effective length of database: 8,282,721
Effective search space: 3437329215
Effective search space used: 3437329215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)