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Os03g0124500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0355) R2 : 0.501
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.881 (0.0909) R2dC : 0.103 R2C : 0.0613
β3 : -1.85 (0.19) R2dE : 0.11 R2E : 0.119
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.01 (0.0761) R2dN8 : 0.266 R2N8 : 0.279
σ : 0.663
deviance : 202.39
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C
peak time of C : 4.37
E
wheather : temperature
threshold : 19.14
memory length : 3425
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
189.51 0.647 10.8 -0.391 0.834 -2.84 2 -1.89 0.961 4.02 19 4222 -- --
189.47 0.641 10.8 -0.373 0.859 -2.14 1.96 -- 0.951 4.12 19.29 3567 -- --
200.11 0.659 10.8 -0.432 0.877 -3.08 -- -2.34 0.946 4.29 19 4511 -- --
199.9 0.658 10.9 -0.376 0.881 -2.08 -- -- 0.941 4.4 19.52 3485 -- --
239.02 0.72 10.8 -0.352 -- -3.08 -- -2.54 0.983 -- 18.74 3800 -- --
230.62 0.712 10.8 0.452 0.891 -- 1.79 -- 1.24 4.04 -- -- -- --
239.59 0.725 10.8 0.431 0.909 -- -- -- 1.23 4.31 -- -- -- --
240.82 0.723 10.9 -0.405 -- -2.07 -- -- 0.948 -- 19.53 3790 -- --
202.39 0.663 10.8 -- 0.881 -1.85 -- -- 1.01 4.37 19.14 3425 -- --
284.09 0.788 10.8 0.468 -- -- -- -- 1.25 -- -- -- -- --
244.5 0.731 10.8 -- 0.917 -- -- -- 1.18 4.3 -- -- -- --
243.55 0.727 10.8 -- -- -1.9 -- -- 1.03 -- 19 3657 -- --
289.86 0.795 10.8 -- -- -- -- -- 1.2 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 175.78 radiation 40 43200 > th dose dependent rect. 8 1
19 177.09 radiation 40 43200 < th dose independent rect. 8 1
20 177.83 radiation 40 43200 < th dose independent rect. 1 8
29 177.92 radiation 40 43200 < th dose independent rect. 17 16
36 178.30 humidity 60 43200 < th dose independent rect. 17 21
38 178.49 humidity 60 43200 < th dose independent rect. 3 11
42 178.59 humidity 60 43200 < th dose independent rect. 22 16
43 178.64 humidity 60 43200 > th dose independent rect. 6 7
55 179.01 wind 9 43200 < th dose independent rect. 18 4
60 179.18 wind 9 43200 > th dose independent rect. 18 5
65 179.25 humidity 60 43200 > th dose independent rect. 18 20
68 179.30 wind 9 43200 > th dose dependent rect. 18 5
73 179.49 humidity 70 43200 < th dose dependent rect. 11 1
75 179.57 humidity 70 43200 > th dose independent rect. 19 2
78 179.65 humidity 70 43200 < th dose independent rect. 19 2
79 179.71 humidity 60 43200 < th dose independent sin 5 NA
80 179.74 humidity 60 43200 > th dose independent rect. 21 17
90 179.95 wind 5 14400 < th dose independent rect. 13 3
91 179.95 wind 7 43200 > th dose dependent rect. 18 3
101 180.03 wind 5 14400 > th dose independent rect. 13 3
121 180.30 humidity 60 43200 > th dose independent rect. 11 1
124 180.39 humidity 60 43200 > th dose independent sin 5 NA
127 180.41 humidity 70 43200 < th dose dependent rect. 18 2
130 180.46 wind 5 14400 > th dose independent rect. 15 1
148 180.69 humidity 60 43200 > th dose independent rect. 17 4
160 180.82 radiation 10 14400 > th dose dependent rect. 5 2
172 180.83 humidity 60 43200 < th dose independent rect. 17 3
184 180.92 humidity 80 43200 < th dose dependent rect. 20 1
199 181.17 humidity 60 43200 < th dose independent rect. 17 7
220 181.33 radiation 20 14400 < th dose independent rect. 3 4
232 181.37 wind 9 43200 > th dose dependent rect. 21 2
238 181.40 wind 5 43200 > th dose dependent rect. 24 1
251 181.45 wind 7 43200 > th dose dependent rect. 17 8
278 181.62 humidity 60 43200 < th dose independent no NA NA
282 181.64 humidity 60 43200 < th dose independent rect. 3 23
286 181.67 wind 9 43200 > th dose independent rect. 17 8
288 181.67 humidity 60 43200 < th dose independent rect. 24 23
294 181.70 humidity 60 43200 < th dose independent rect. 6 23
316 181.78 wind 7 43200 > th dose independent rect. 15 14
331 181.82 wind 7 43200 > th dose dependent rect. 16 13
338 181.84 radiation 1 14400 < th dose independent rect. 24 5
349 181.88 humidity 70 43200 < th dose dependent rect. 16 22
361 181.93 wind 9 43200 < th dose independent rect. 17 8
372 181.97 wind 7 43200 > th dose independent sin 14 NA
380 181.99 humidity 70 43200 < th dose dependent sin 2 NA
394 182.03 wind 7 43200 > th dose independent rect. 14 17
401 182.05 wind 7 43200 < th dose independent rect. 15 13
437 182.15 radiation 20 14400 > th dose independent rect. 17 14
457 182.18 humidity 70 43200 < th dose dependent rect. 7 16
466 182.19 wind 7 43200 > th dose dependent sin 14 NA
471 182.20 wind 7 43200 < th dose independent rect. 15 11
484 182.22 wind 7 43200 < th dose independent sin 14 NA
510 182.25 radiation 20 14400 > th dose independent rect. 6 1
609 182.37 wind 5 43200 > th dose independent rect. 24 1
642 182.40 humidity 70 43200 < th dose dependent no NA NA
696 182.47 wind 7 43200 > th dose dependent rect. 14 17
755 182.58 wind 7 43200 < th dose independent rect. 24 2
797 182.64 humidity 70 43200 < th dose independent rect. 6 4
941 182.87 humidity 70 43200 > th dose independent rect. 5 5
953 182.90 humidity 50 43200 < th dose independent rect. 12 1
954 182.90 radiation 10 43200 < th dose independent rect. 17 1
983 182.95 humidity 50 43200 < th dose dependent rect. 11 2