Os03g0118600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydrodipicolinate reductase-like protein.
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Os03g0118600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dihydrodipicolinate reductase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.52 | 0.617 | 7.82 | -4.42 | 2 | -1.89 | -1.32 | -0.692 | -1.42 | 23.1 | 29.61 | 277 | -- | -- |
| 173.02 | 0.613 | 7.84 | -4.48 | 1.95 | -1.85 | -1.37 | -- | -1.43 | 23.1 | 29.83 | 314 | -- | -- |
| 179.86 | 0.625 | 7.82 | -4.35 | 2.02 | -1.86 | -- | -0.729 | -1.4 | 23.1 | 29.73 | 256 | -- | -- |
| 181.05 | 0.627 | 7.83 | -4.49 | 1.96 | -1.94 | -- | -- | -1.44 | 23.2 | 29.84 | 307 | -- | -- |
| 314.56 | 0.826 | 7.85 | -4.97 | -- | -3.09 | -- | 0.665 | -1.68 | -- | 30.26 | 777 | -- | -- |
| 221.04 | 0.697 | 7.76 | -4.07 | 1.99 | -- | -1.48 | -- | -1.06 | 22.1 | -- | -- | -- | -- |
| 229.69 | 0.71 | 7.76 | -4.01 | 1.99 | -- | -- | -- | -1.06 | 22.1 | -- | -- | -- | -- |
| 314.86 | 0.826 | 7.84 | -4.83 | -- | -3.07 | -- | -- | -1.65 | -- | 30.2 | 777 | -- | -- |
| 653.69 | 1.2 | 7.65 | -- | 1.96 | 0.111 | -- | -- | -0.594 | 21.8 | 29.84 | 307 | -- | -- |
| 469.46 | 1.01 | 7.7 | -3.99 | -- | -- | -- | -- | -1.06 | -- | -- | -- | -- | -- |
| 653.88 | 1.2 | 7.66 | -- | 1.98 | -- | -- | -- | -0.613 | 21.9 | -- | -- | -- | -- |
| 860.38 | 1.37 | 7.64 | -- | -- | -1.28 | -- | -- | -0.773 | -- | 42.45 | 722 | -- | -- |
| 888.57 | 1.39 | 7.6 | -- | -- | -- | -- | -- | -0.615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 4 | 166.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 10 | 168.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 14 | 169.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 15 | 169.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 16 | 169.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 17 | 169.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 20 | 170.00 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 21 | 170.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 27 | 170.23 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 21 |
| 29 | 170.28 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 32 | 170.51 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 33 | 170.63 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 46 | 171.19 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 62 | 171.44 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 20 |
| 68 | 171.59 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 98 | 172.19 | temperature | 20.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 115 | 172.40 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 131 | 172.57 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 143 | 172.69 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 159 | 172.83 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 162 | 172.87 | temperature | 30.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 169 | 172.95 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 201 | 173.24 | temperature | 30.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 270 | 173.77 | temperature | 10.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 295 | 173.90 | temperature | 20.0 | 270 | > th | dose dependent | no | NA | NA |
| 330 | 174.10 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 392 | 174.46 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 395 | 174.50 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 406 | 174.58 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 8 | 14 |
| 409 | 174.61 | temperature | 25.0 | 270 | < th | dose independent | sin | 0 | NA |
| 412 | 174.63 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 417 | 174.71 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 428 | 174.76 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 431 | 174.78 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 439 | 174.83 | temperature | 25.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 450 | 174.88 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 459 | 174.91 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 8 | 14 |
| 493 | 175.06 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 576 | 175.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 580 | 175.39 | temperature | 25.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 653 | 175.67 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 763 | 175.99 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 817 | 176.17 | temperature | 25.0 | 270 | > th | dose independent | sin | 0 | NA |
| 834 | 176.20 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 2 | 20 |
| 914 | 176.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 23 |
| 959 | 176.52 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 974 | 176.56 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 997 | 176.62 | temperature | 25.0 | 270 | > th | dose independent | no | NA | NA |
| 999 | 176.62 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 12 |