Os03g0118100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0118100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 739.27 | 1.28 | 4.64 | -2.96 | 0.904 | 1.8 | -1.39 | 0.0678 | -1.28 | 10.5 | 44.93 | 1312 | -- | -- |
| 739.28 | 1.27 | 4.64 | -2.96 | 0.905 | 1.8 | -1.4 | -- | -1.28 | 10.5 | 44.95 | 1311 | -- | -- |
| 747 | 1.27 | 4.64 | -3 | 0.919 | 1.81 | -- | 0.326 | -1.28 | 10.3 | 44.86 | 1311 | -- | -- |
| 747.13 | 1.27 | 4.65 | -3.03 | 0.918 | 1.82 | -- | -- | -1.29 | 10.3 | 44.8 | 1311 | -- | -- |
| 788.42 | 1.31 | 4.66 | -2.97 | -- | 1.69 | -- | 0.493 | -1.25 | -- | 46.37 | 1414 | -- | -- |
| 823.43 | 1.35 | 4.61 | -2.93 | 0.724 | -- | -1.5 | -- | -1.11 | 10.2 | -- | -- | -- | -- |
| 831.98 | 1.35 | 4.61 | -2.99 | 0.744 | -- | -- | -- | -1.11 | 9.7 | -- | -- | -- | -- |
| 788.55 | 1.31 | 4.66 | -3 | -- | 1.71 | -- | -- | -1.24 | -- | 46.39 | 1414 | -- | -- |
| 973.21 | 1.45 | 4.51 | -- | 0.769 | 2.37 | -- | -- | -0.745 | 10.6 | 52.7 | 1403 | -- | -- |
| 864.89 | 1.37 | 4.63 | -3 | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
| 1067.35 | 1.53 | 4.53 | -- | 0.753 | -- | -- | -- | -0.779 | 10 | -- | -- | -- | -- |
| 1011.65 | 1.48 | 4.55 | -- | -- | 2.31 | -- | -- | -0.738 | -- | 53.04 | 1427 | -- | -- |
| 1101.51 | 1.55 | 4.55 | -- | -- | -- | -- | -- | -0.778 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 728.67 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 2 | 728.72 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 3 | 732.14 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 4 | 733.64 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 19 | 734.22 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 20 | 734.42 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 21 | 734.52 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 35 | 735.66 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 48 | 738.08 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 61 | 738.72 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 75 | 739.11 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 91 | 739.57 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 160 | 740.14 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 176 | 740.31 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 233 | 741.13 | humidity | 70 | 1440 | < th | dose dependent | sin | 13 | NA |
| 250 | 741.39 | humidity | 60 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 259 | 741.53 | humidity | 60 | 1440 | > th | dose independent | rect. | 17 | 8 |
| 261 | 741.59 | humidity | 60 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 352 | 743.50 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 370 | 743.75 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 386 | 744.48 | humidity | 60 | 1440 | > th | dose independent | sin | 13 | NA |
| 432 | 744.88 | radiation | 40 | 1440 | > th | dose dependent | sin | 13 | NA |
| 433 | 744.89 | humidity | 50 | 1440 | < th | dose independent | sin | 12 | NA |
| 524 | 745.74 | radiation | 40 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 535 | 745.97 | radiation | 40 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 608 | 746.72 | humidity | 50 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 629 | 746.84 | humidity | 50 | 1440 | > th | dose independent | rect. | 22 | 19 |
| 633 | 746.89 | humidity | 50 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 644 | 747.09 | humidity | 50 | 1440 | > th | dose independent | rect. | 2 | 15 |
| 709 | 747.53 | radiation | 40 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 791 | 747.88 | radiation | 40 | 1440 | > th | dose dependent | no | NA | NA |
| 933 | 747.97 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 986 | 748.37 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 23 |