Os03g0117800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Fructosamine kinase family protein.
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Os03g0117800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Fructosamine kinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.23 | 0.33 | 13.2 | -0.337 | 1.15 | -0.679 | -0.242 | -1.14 | -0.512 | 19.7 | 50.28 | 1400 | -- | -- |
| 51.1 | 0.333 | 13.2 | -0.479 | 1.13 | -0.832 | -0.286 | -- | -0.537 | 19.4 | 46.73 | 1253 | -- | -- |
| 49.38 | 0.327 | 13.2 | -0.343 | 1.15 | -0.69 | -- | -1.12 | -0.515 | 19.7 | 51.6 | 1388 | -- | -- |
| 51.32 | 0.334 | 13.2 | -0.471 | 1.12 | -0.828 | -- | -- | -0.536 | 19.4 | 50 | 1256 | -- | -- |
| 66.69 | 0.38 | 13.2 | -0.295 | -- | -1.45 | -- | -1.42 | -0.55 | -- | 67.32 | 687 | -- | -- |
| 65.87 | 0.38 | 13.2 | -0.427 | 1.13 | -- | -0.214 | -- | -0.505 | 19.9 | -- | -- | -- | -- |
| 66 | 0.38 | 13.2 | -0.421 | 1.13 | -- | -- | -- | -0.506 | 19.9 | -- | -- | -- | -- |
| 65.12 | 0.376 | 13.2 | -0.431 | -- | -1.54 | -- | -- | -0.626 | -- | 67.31 | 679 | -- | -- |
| 56.93 | 0.351 | 13.2 | -- | 1.14 | -0.787 | -- | -- | -0.49 | 19.4 | 55.55 | 1266 | -- | -- |
| 135.94 | 0.545 | 13.2 | -0.433 | -- | -- | -- | -- | -0.521 | -- | -- | -- | -- | -- |
| 70.68 | 0.393 | 13.2 | -- | 1.14 | -- | -- | -- | -0.459 | 19.9 | -- | -- | -- | -- |
| 70.08 | 0.39 | 13.2 | -- | -- | -1.53 | -- | -- | -0.584 | -- | 68.73 | 671 | -- | -- |
| 140.89 | 0.554 | 13.2 | -- | -- | -- | -- | -- | -0.473 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.18 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 5 | 47.49 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 10 | 47.61 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 11 | 47.61 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 12 | 47.64 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 29 | 47.83 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 138 | 48.62 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 179 | 48.77 | humidity | 60 | 1440 | > th | dose dependent | sin | 23 | NA |
| 185 | 48.80 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 448 | 49.29 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 459 | 49.31 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 460 | 49.31 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 473 | 49.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 516 | 49.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 538 | 49.38 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 572 | 49.43 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 582 | 49.45 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 19 |
| 583 | 49.45 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 663 | 49.54 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 683 | 49.55 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 720 | 49.59 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 738 | 49.62 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 743 | 49.63 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 762 | 49.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 793 | 49.70 | humidity | 90 | 1440 | < th | dose dependent | sin | 22 | NA |
| 795 | 49.70 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 873 | 49.80 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 916 | 49.87 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |